iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121116

Ensembl Protein ID

EOY06016

UniProt Accession

A0A061EMD3; A0A061EMD3_THECC

Genbank Protein ID

EOY06016.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_020868

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_020868	EOY06016	EOY06016

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-09	37.5	133	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++ p C Hvfh dC+  w       +++++CPlCr
   Q: 133  CAVCLNEFqeDEKLRIIPnCSHVFHIDCIDVW------LQNNANCPLCR 175
           ********87444999999*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDLVSKSYTN TIRVSQALSP ITSPGNSILG PHLHSSDTSF PIIAIAVIGI LATAFLLVSY 60
YIFVIKCCLN WHRIDLLRRF SLSRRQHEDP LMAYSPAMEH RGLDESVIRS IPIFQFKKGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTAAATGC ACTCTTTTTC TTTTTTTCGT TTTTTTTTTC TATTTTTTGG CCTTTTTCTT 60
TTGTTTCCGA CTGCAAAAAC AATGGTGAAA AACTGAAAAT TTGTTAAAAA GGTGCAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	37.01	1.00e-33	135.00
IUUC-Atr-003120	Amborella trichopoda	46.54	4.00e-60	224.00
IUUC-Aly-006068	Arabidopsis lyrata	62.50	7.00e-102	363.00
IUUC-Ath-006598	Arabidopsis thaliana	62.95	3.00e-101	361.00
IUUC-Bdi-014676	Brachypodium distachyon	40.85	7.00e-27	112.00
IUUC-Bol-015196	Brassica oleracea	61.27	3.00e-94	337.00
IUUC-Bra-017431	Brassica rapa	59.12	3.00e-95	340.00
IUUC-Gma-044038	Glycine max	68.48	2.00e-117	414.00
IUUC-Hvu-047348	Hordeum vulgare	35.12	2.00e-33	135.00
IUUC-Lpe-051091	Leersia perrieri	38.83	1.00e-38	152.00
IUUC-Mtr-057939	Medicago truncatula	62.46	6.00e-96	343.00
IUUC-Mac-064540	Musa acuminata	45.94	5.00e-65	240.00
IUUC-Oba-075181	Oryza barthii	35.64	5.00e-38	150.00
IUUC-Obr-076646	Oryza brachyantha	37.50	1.00e-39	155.00
IUUC-Ogl-077643	Oryza glaberrima	35.64	3.00e-38	151.00
IUUC-Ogu-078678	Oryza glumaepatula	35.64	6.00e-38	150.00
IUUC-Oin-080156	Oryza indica	35.64	1.00e-38	152.00
IUUC-Olo-080454	Oryza longistaminata	37.50	5.00e-41	160.00
IUUC-Ome-081367	Oryza meridionalis	34.50	8.00e-29	119.00
IUUC-Oni-082085	Oryza nivara	35.64	5.00e-38	151.00
IUUC-Opu-083709	Oryza punctata	36.59	3.00e-38	151.00
IUUC-Oru-084579	Oryza rufipogon	35.29	3.00e-37	148.00
IUUC-Osa-085466	Oryza sativa	35.99	3.00e-37	148.00
IUUC-Pop-098991	Populus trichocarpa	78.55	9.00e-135	472.00
IUUC-Ppe-101210	Prunus persica	74.73	2.00e-126	444.00
IUUC-Sit-110640	Setaria italica	33.44	1.00e-32	132.00
IUUC-Sly-111856	Solanum lycopersicum	57.22	2.00e-92	331.00
IUUC-Stu-111992	Solanum tuberosum	65.70	2.00e-94	338.00
IUUC-Sbi-114476	Sorghum bicolor	36.45	4.00e-30	124.00
IUUC-Tae-124958	Triticum aestivum	36.65	4.00e-34	137.00
IUUC-Tur-126127	Triticum urartu	36.07	8.00e-34	136.00
IUUC-Vvi-131101	Vitis vinifera	78.31	1.00e-124	438.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence