iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017611

Ensembl Protein ID

Bra022347.1-P

UniProt Accession

M4E0Q0; M4E0Q0_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022347	Bra022347.1	Bra022347.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.10e-30	104.1	12	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp +f+CpIsl++Mr Pv l++G+tydr sI++wl+ g++tcP t+q l+++dlvPnltl+rli+aw ++ +
   Q: 12   VPTFFKCPISLDVMRSPVSLSTGVTYDRPSIQRWLDGGNNTCPATMQILKSKDLVPNLTLQRLIKAWSDSVG 83
           89*****************************************************************98876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGRDETEMYI TVPTFFKCPI SLDVMRSPVS LSTGVTYDRP SIQRWLDGGN NTCPATMQIL 60
KSKDLVPNLT LQRLIKAWSD SVGSPTAASS PDPASARGIP TVEEVNDSLM RLSQEKDDEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGAG ATGAAACCGA GATGTACATT ACGGTGCCTA CCTTCTTCAA GTGTCCGATA 60
TCTCTCGACG TTATGAGATC TCCCGTTAGT CTCTCCACCG GCGTCACCTA CGATCGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006554	Arabidopsis lyrata	77.62	1.00e-167	582.00
IUUC-Ath-006814	Arabidopsis thaliana	75.64	3.00e-158	550.00
IUUC-Bol-015298	Brassica oleracea	92.22	0.00e+00	637.00
IUUC-Obr-076531	Oryza brachyantha	68.97	2.00e-19	90.10
IUUC-Olo-080339	Oryza longistaminata	80.95	6.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence