iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114172

UUCD1 version

UUC-SoB-00258

Ensembl Protein ID

Sb01g033820.1

UniProt Accession

A0A1B6QMW8; A0A1B6QMW8_SORBI

Genbank Protein ID

KXG39247.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G353400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g033820	Sb01g033820.1	Sb01g033820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-08	34.4	304	337

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+d  ++ a+ +d + l++G+ Dgt+++WD r+
   Q: 304  GHQDYSFSSAWhPDgRVLATGNQDGTCRLWDARS 337
           8***********99999**************765 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAHDLCDDLE LVADCGYDDD DYLDDFHFHD DDGFPSSPAT TTAAASGSGL QQHEQMDNTS 60
ALDYKEGKDM QGIPWERLNY TREQYRQMRL KEYKSYQNLT RSRSGLQQEC KQVERKDTFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCAACGCT GATAAGAGGA GCTCTTTCTA TTCTGCATCT ACTACTCCTC ACCTCATAGA 60
TCGATTGCCG TGGGCACCGG CAGCTCCGAC CTCGCCTCGC CCCCCTTTGG CCGATCGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051582	Leersia perrieri	70.93	0.00e+00	640.00
IUUC-Obr-076093	Oryza brachyantha	69.96	0.00e+00	627.00
IUUC-Ogu-078133	Oryza glumaepatula	72.83	0.00e+00	639.00
IUUC-Oin-079185	Oryza indica	70.17	0.00e+00	625.00
IUUC-Olo-080479	Oryza longistaminata	69.61	4.00e-155	540.00
IUUC-Oni-082850	Oryza nivara	72.83	0.00e+00	637.00
IUUC-Pte-104305	Pyrenophora teres	29.66	4.00e-46	178.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	30.45	9.00e-49	187.00
IUUC-Zma-135778	Zea mays	69.88	4.00e-176	609.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence