iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076602

Ensembl Protein ID

OB08G28020.1

UniProt Accession

J3MUM1; J3MUM1_ORYBR

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB08G28020	OB08G28020.1	OB08G28020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.90e-54	184.4	279	615

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           G+ NlgNtCYmN++LQcL+ + +lr  +l           p+ p+  l  +l++lfee+   ++ +++ +p++++++l+ +  ++ g++ qD++E+l
   Q: 279  GMPNLGNTCYMNALLQCLFVLGKLRARMLA----------PDAPSDMLGVALKDLFEEVNnvNNARHQLNPTKFFSCLCILDARYAGSDMQDSHELL 365
           9*****************************..........4567789************9899********************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke........ 185
           + +ld+l ee                        + +     +++++ +F+ +++ ++ c  c  +s + e  +d+slp+p ++   k+        
   Q: 366  CLILDRLVEEE-----------------------KLNMAAVIPTVVDSIFRSHISVTMSCTCCSYSSPSCEVTYDISLPLPLERPPPKSialpprni 439
           *********99.......................346778999**************************************999665559999**** PP
   S: 186  ................................................................................................. 185
                                                                                                            
   Q: 440  scmsqektgtklfpeddmsntehiqaiaagrdshvtgleprdvavekiseplevdsievehssrtkdglcvpsqtqkdnvpgeivqvptkagdlgqn 536
           ************************************************************************************************* PP
   S: 186  ....................................................slqdcLesftkeeelegenkyycekckkkqe 216
                                                               s+++cL+  +k+e le    ++cekc k  +
   Q: 537  dntglgntssepevsikdkkntcsvegaaedkrksqgrnidhgkteannslaSIEECLALHFKAELLE----WNCEKCSKAAQ 615
           *******************************************************************9....******98765 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDHAEKTLPE ASKRKAKAAA PTSNTEMGLC PHFVRFEEDM VRFVSKLRSS ERAPRCEHYL 60
CENKVEKSSI LVCIDCNLHF CIGSGTKNSP QGHARWHAEL EQHPVGAFSS EPQTLYCFIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCACG CCGAGAAGAC TCTGCCGGAG GCGAGCAAGC GGAAAGCGAA GGCGGCGGCG 60
CCGACCAGCA ACACCGAGAT GGGGCTATGC CCCCACTTTG TACGTTTCGA GGAAGACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001048	Aegilops tauschii	39.86	9.00e-135	473.00
IUUC-Bdi-014985	Brachypodium distachyon	39.04	9.00e-131	460.00
IUUC-Hvu-047538	Hordeum vulgare	39.83	4.00e-135	474.00
IUUC-Lpe-050943	Leersia perrieri	58.36	0.00e+00	1024.00
IUUC-Oba-075758	Oryza barthii	65.43	0.00e+00	1137.00
IUUC-Ogl-077119	Oryza glaberrima	65.43	0.00e+00	1136.00
IUUC-Ogu-078236	Oryza glumaepatula	65.89	0.00e+00	1147.00
IUUC-Oin-079217	Oryza indica	65.63	0.00e+00	1137.00
IUUC-Olo-080676	Oryza longistaminata	65.72	0.00e+00	1112.00
IUUC-Ome-081974	Oryza meridionalis	64.83	0.00e+00	1035.00
IUUC-Oni-082206	Oryza nivara	65.63	0.00e+00	1137.00
IUUC-Opu-083353	Oryza punctata	68.69	0.00e+00	1203.00
IUUC-Oru-084812	Oryza rufipogon	65.76	0.00e+00	1141.00
IUUC-Osa-085674	Oryza sativa	65.76	0.00e+00	1141.00
IUUC-Sit-110506	Setaria italica	32.45	5.00e-76	278.00
IUUC-Sbi-114695	Sorghum bicolor	34.31	2.00e-93	336.00
IUUC-Tae-124116	Triticum aestivum	39.57	3.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence