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Tag Content
iUUCD ID IUUC-Aly-006494
Ensembl Protein ID scaffold_400058.1
UniProt Accession D7LBD0; D7LBD0_ARALL
Genbank Protein ID EFH54810.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348716
Gene Name ARALYDRAFT_900557
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_400058.1 scaffold_400058.1 scaffold_400058.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.70e-39 130.9 49 86
UBD/Beta-Prp 2.00e-73 247.9 3 322
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    gH+++v++++f ++ +l+vsG+dD++ikvW+++t+ +l
   Q: 49 GHQGPVRGVHFhTSqPLFVSGGDDCKIKVWNYKTHWCL 86
    8**********9556****************9998776 PP
   


   UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
    t +++++++++ + f+p++++++++ +g i++wd++ g+l+ ++ gh+++v+ v f+ +++++v+g++D ikvw+++t c+ tl gh d
   Q: 3 TKFKTKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRVGTLIDKFDGHQGPVRGVHFHTSQPLFVSGGDDCKIKVWNYKTHWCLFTLLGHLD 94
    667889999*********************************************************************************** PP
   S: 96 svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..................... 166
    ++++++f+ + +++s+s+d+tir+w++++++c++ +l+ h++ v+c+++hp+++l+vs+slD+tvr+W +
   Q: 95 YIRTVQFHHEYPWILSASDDQTIRIWNWQSRTCVS-VLAAHNHYVMCASFHPKDDLVVSASLDQTVRVWEIgalkkktvspsddimrlaein 185
    ***********************************.********************************************999999888887 PP
   S: 167 ......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
    ++ + l+g h++ v + +f++n + +vsgs+d++vklw + +++ v+tl+gh +nv+sv f+ +++++vs s+D+sir+Wd
   Q: 186 sdlfdsVDVTVKYVLEG-HERGVIWAAFHPNLPLIVSGSDDRQVKLWRMNETKAweVDTLRGHMNNVSSVMFHAKQDIIVSNSEDNSIRVWD 276
    77776333333444466.********************************887778************************************ PP
   S: 251 lrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkne 298
    ++++ ++t+ +++++++s av +++ n l++g + + ++kl++++
   Q: 277 ATKRTEIQTFRREHDRFWSLAV-HPEINLLAAGHD-NGMIVFKLERER 322
    **********************.888777777755.566677887766 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MLTKFKTKSN RVKGLSFHPK RPWILASLHS GVIQLWDYRV GTLIDKFDGH QGPVRGVHFH 60
TSQPLFVSGG DDCKIKVWNY KTHWCLFTLL GHLDYIRTVQ FHHEYPWILS ASDDQTIRIW 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006494|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTATCGGAG AACGGAGATT ATGTTGACCA AGTTCAAGAC CAAGAGTAAC AGAGTTAAAG 60
GTCTGAGCTT TCACCCTAAA AGACCATGGA TTCTCGCCAG TTTACACAGT GGTGTGATCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006494|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG aly:ARALYDRAFT_900557
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Afl-008644 Aspergillus flavus 43.73 0.00e+00 1004.00
IUUC-Ani-009379 Aspergillus nidulans 44.46 0.00e+00 1036.00
IUUC-Aor-010174 Aspergillus oryzae 43.73 0.00e+00 1004.00
IUUC-Cne-027053 Cryptococcus neoformans 47.48 0.00e+00 1073.00
Created Date 25-Jun-2017

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