iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075018

Ensembl Protein ID

OBART06G00880.1

UniProt Accession

A0A0D3GC09; A0A0D3GC09_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART06G00880	OBART06G00880.1	OBART06G00880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.00e-37	128.1	308	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 2    sLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           + L+l+ +  a++i+gk+peeiR tF i nDftpeEe+++ +En+WA
   Q: 308  GVLELAVQRTAELIRGKSPEEIRDTFKIANDFTPEEEEEIINENAWA 354
           679*******************************************9 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MSSWPLIGNQ SPNVGRLRDR SASEFAVDQF RHLSARVTSS MAAAAEEKNK KMIKVISSDG 60
EAFEMTEAAA SMSRILLHMI EDGCTGAGGA GITLPNVAGS ALAKVIEYCT KHAIAAAEGS 120

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Nucleotide Sequence
(Fasta)

ATGAGCTCAT GGCCCCTGAT CGGCAATCAA TCACCAAACG TGGGTCGTCT CAGAGATCGA 60
TCAGCTTCAG AATTCGCCGT CGATCAATTT AGACATCTAT CAGCTCGCGT GACATCATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogu-078635	Oryza glumaepatula	99.22	4.00e-70	257.00
IUUC-Olo-080834	Oryza longistaminata	97.20	4.00e-78	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence