iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076226

Ensembl Protein ID

OB12G20370.1

UniProt Accession

J3NDH9; J3NDH9_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G20370	OB12G20370.1	OB12G20370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-70	238.3	257	580

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++v+++el+k++++    +++++q+D+qE+ +
   Q: 257  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDMPSGSIPLALQSLFYKL-QYSDNSVATKELTKSFGWDT--YDSFMQHDVQELNR 345
           6******************************.....555556789***************.88899************877..67************ PP
   S: 98   flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesf 194
           +l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v+g +     ++  +++++
   Q: 346  VLCEKLEDKM--------------------------KGTVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCR-----DVYASFDKY 411
           **********..........................7899*******************************************.....9******** PP
   S: 195  tkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavvvHs 287
           ++ e+leg+nky+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++ +  + + ++ Y L++v+vHs
   Q: 412  VEVERLEGDNKYHAEQY-GLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDrddgKYLAPDA-DRSIRNLYTLHSVLVHS 506
           ***************97.69************************************************88877887755.5556************* PP
   S: 288  GslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYkr 337
           G++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+                        s+aY+l+Y r
   Q: 507  GGVHGGHYYAFIRPtLSDQWYKFDDERVTKEDTKKALEEQYggeeelpqinpgfnntpfkftkySNAYMLVYIR 580
           *************945677*************9999997779******************************87 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MTMMTPPPVE VRAAALPSFP CPPHARPLPR RPDPRGGLPA VYARCRIWAH HPSPTPLAQQ 60
QQEDEEMLVP HQELPAVTAA AAAPDAAQPM EVVAQTEPAN TAESQPPEDP QTSRFTWTIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTATGA TGACCCCTCC CCCAGTCGAG GTACGTGCTG CTGCCCTTCC CTCCTTCCCC 60
TGCCCCCCCC ACGCGCGCCC GCTTCCGCCG CCGACCCGAT CCCCGCGGCG GGTTGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003067	Amborella trichopoda	89.36	0.00e+00	1548.00
IUUC-Bdi-015069	Brachypodium distachyon	92.06	0.00e+00	1985.00
IUUC-Lpe-051543	Leersia perrieri	93.24	0.00e+00	1994.00
IUUC-Mtr-058585	Medicago truncatula	85.14	0.00e+00	1857.00
IUUC-Oba-075811	Oryza barthii	92.06	0.00e+00	1964.00
IUUC-Ogl-077912	Oryza glaberrima	96.26	0.00e+00	2062.00
IUUC-Ogu-078130	Oryza glumaepatula	91.25	0.00e+00	1932.00
IUUC-Oin-079513	Oryza indica	94.16	0.00e+00	1966.00
IUUC-Olo-081067	Oryza longistaminata	92.64	0.00e+00	1931.00
IUUC-Oni-082978	Oryza nivara	90.98	0.00e+00	1928.00
IUUC-Opu-083199	Oryza punctata	95.59	0.00e+00	2021.00
IUUC-Oru-084739	Oryza rufipogon	90.90	0.00e+00	1924.00
IUUC-Sit-110268	Setaria italica	93.87	0.00e+00	2018.00
IUUC-Stu-112387	Solanum tuberosum	81.67	0.00e+00	1811.00
IUUC-Sbi-114424	Sorghum bicolor	93.23	0.00e+00	2027.00
IUUC-Tca-121630	Theobroma cacao	86.19	0.00e+00	1892.00
IUUC-Tae-125233	Triticum aestivum	91.72	0.00e+00	2003.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence