iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Opu-083293

Ensembl Protein ID

OPUNC01G32110.1

UniProt Accession

A0A0E0JPI6; A0A0E0JPI6_ORYPU

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OPUNC01G32110	OPUNC01G32110.1	OPUNC01G32110.1
OPUNC01G32110	OPUNC01G32110.2	OPUNC01G32110.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-24	85.8	291	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + ++ ++f +d + +v+G+ D+ +kvWDl+ g+ll+
   Q: 291  GHRGAIRTIRFtPDgRWVVTGGEDNIVKVWDLTAGKLLH 329
           8***********99999******************9986 PP

Organism

Oryza punctata

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MWGLSFISFS RNAREENLTL ASFGTKERNE NKSELEGGEG GRGEKGRRQK LSTLSLRLHS 60
PPPTHPRCST PLVFTAGCER GRGKIRRHGC RLSLGLALLL HIPSTRIPNP LPPLVVDDDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGGGAC TTTCCTTTAT TTCATTCTCA AGGAACGCGA GAGAAGAGAA CCTTACTTTA 60
GCCAGCTTTG GTACAAAAGA AAGAAACGAG AACAAAAGCG AACTAGAGGG AGGCGAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000869	Aegilops tauschii	72.39	0.00e+00	1139.00
IUUC-Bdi-014531	Brachypodium distachyon	67.61	0.00e+00	1115.00
IUUC-Hvu-047729	Hordeum vulgare	65.19	0.00e+00	780.00
IUUC-Oba-075016	Oryza barthii	87.93	0.00e+00	1284.00
IUUC-Obr-076138	Oryza brachyantha	78.32	0.00e+00	1305.00
IUUC-Ogl-077401	Oryza glaberrima	83.63	0.00e+00	1379.00
IUUC-Ogu-078062	Oryza glumaepatula	86.06	0.00e+00	1407.00
IUUC-Oin-080042	Oryza indica	85.82	0.00e+00	1405.00
IUUC-Olo-080713	Oryza longistaminata	88.66	0.00e+00	1284.00
IUUC-Ome-081192	Oryza meridionalis	90.18	0.00e+00	1308.00
IUUC-Oni-082473	Oryza nivara	88.25	0.00e+00	1419.00
IUUC-Oru-085183	Oryza rufipogon	85.82	0.00e+00	1404.00
IUUC-Osa-085801	Oryza sativa	83.51	0.00e+00	1377.00
IUUC-Sit-110364	Setaria italica	69.88	0.00e+00	1048.00
IUUC-Sbi-114389	Sorghum bicolor	61.10	0.00e+00	972.00
IUUC-Tae-125511	Triticum aestivum	66.78	0.00e+00	1063.00
IUUC-Tur-126181	Triticum urartu	63.53	0.00e+00	1068.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence