iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112639

Ensembl Protein ID

PGSC0003DMT400038197

UniProt Accession

M1B6H0; M1B6H0_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400014733	PGSC0003DMT400038197	PGSC0003DMT400038197

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-33	115.0	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           evp++flCpIs++lMrdPv++++Gitydr++Iekwl ++++ tcP+t+q+l   dl+Pn+tlrr+iq+wc  nss
   Q: 5    EVPDYFLCPISMQLMRDPVTTSTGITYDRENIEKWLFKCKNtTCPITKQELLTMDLTPNHTLRRVIQSWCIMNSS 79
           69**********************************888777****************************87765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEDVEVPDYF LCPISMQLMR DPVTTSTGIT YDRENIEKWL FKCKNTTCPI TKQELLTMDL 60
TPNHTLRRVI QSWCIMNSSH GVERIPTPKS QVTKSYVLKL LKQAMQSQEM QLSCLRKLKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGATG TTGAAGTTCC AGATTATTTC CTTTGTCCAA TATCAATGCA ACTAATGAGG 60
GATCCGGTTA CAACATCAAC CGGAATAACC TATGATAGGG AGAACATAGA GAAATGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102594408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Olo-080660	Oryza longistaminata	68.12	2.00e-25	108.00
IUUC-Ppe-101254	Prunus persica	56.36	2.00e-139	487.00
IUUC-Sly-111427	Solanum lycopersicum	88.99	0.00e+00	817.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence