iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017955

Ensembl Protein ID

Bra016618.1-P

UniProt Accession

M4DJE0; M4DJE0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016618	Bra016618.1	Bra016618.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-78	265.2	414	718

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl N gN+CY N+vLQ+L+ +++l  +ll+ +++++++     +++ +l+++l++ +  l  ++ +  s +++l+++++++ ++   +q+Da+Efl
   Q: 414  GLVNCGNSCYANAVLQSLTCTKPLVAYLLQrSHSRSCS-----GKDWCLMCELEQHVMML-RESGGPLSASRILSQMRSINCQIGDGSQEDAHEFL 503
           9*****************************44455554.....6678**********766.9999******************************* PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           + l+ ++++ +                ++l  e + ++  ++++l++++F+g+l+s++kcl+c+++s+r+e+ +dl+l++ g  e    slqd+L 
   Q: 504  RLLVASMQSIC---------------LERLGGETKVDTRLQETTLVQHMFGGRLRSKVKCLRCGHESERYENIMDLTLEIYGWVE----SLQDALT 580
           ***********...............22344456788999******************************************996....8****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG 288
           +ft++e l+gen+y c++c ++++a+k+l++++ P++L++ LkRf    ++++  kink+++fp++Ld+ pf+t++  ++  +  Y L+av+vH  
   Q: 581  QFTRPEDLDGENMYRCSRCAGYVKARKELSIHEAPNILTIVLKRF----QEGRYGKINKCISFPEMLDMIPFMTRTG-DV--PPLYMLYAVIVHLD 669
           *********************************************....458889********************44.44..9***********99 PP
   S: 289  sls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +l+   sGHY++yvk+ +g+W+++dDs++++v++++v +   + aY+lfY+r
   Q: 670  TLNasfSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMS---EGAYMLFYMR 718
           7664458********************************...********98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLEPRGADIP LLFLVLVVFP VVAYILLGKW SDISKKRGRA NLLAQMAAEE AFRAETEVNV 60
NRGVRFEAAA TENRGLRTKT KAAVSAASGA VRDDFVSGVS GTVAEQRYES VAATCGVPVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCGAAC CAAGGGGAGC GGACATACCT TTATTGTTCT TGGTTTTGGT TGTGTTTCCT 60
GTGGTAGCTT ACATATTATT AGGTAAATGG AGTGATATTT CTAAAAAGAG AGGGAGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006034	Arabidopsis lyrata	81.87	0.00e+00	1447.00
IUUC-Ath-007599	Arabidopsis thaliana	81.51	0.00e+00	1417.00
IUUC-Bdi-014717	Brachypodium distachyon	46.42	1.00e-168	586.00
IUUC-Bol-015616	Brassica oleracea	94.17	0.00e+00	1687.00
IUUC-Lpe-051615	Leersia perrieri	75.47	1.00e-152	533.00
IUUC-Mtr-058164	Medicago truncatula	63.57	0.00e+00	673.00
IUUC-Oba-075960	Oryza barthii	61.28	6.00e-158	551.00
IUUC-Obr-076330	Oryza brachyantha	70.73	2.00e-160	559.00
IUUC-Ogl-077370	Oryza glaberrima	66.17	5.00e-161	561.00
IUUC-Ogu-078615	Oryza glumaepatula	61.28	6.00e-158	551.00
IUUC-Oin-079409	Oryza indica	66.17	2.00e-161	562.00
IUUC-Olo-080550	Oryza longistaminata	61.28	2.00e-158	552.00
IUUC-Ome-081508	Oryza meridionalis	61.28	4.00e-158	551.00
IUUC-Oni-082740	Oryza nivara	61.28	6.00e-158	551.00
IUUC-Opu-083669	Oryza punctata	59.27	5.00e-139	488.00
IUUC-Oru-084502	Oryza rufipogon	61.28	6.00e-158	551.00
IUUC-Osa-085475	Oryza sativa	66.17	6.00e-161	561.00
IUUC-Olu-087767	Ostreococcus lucimarinus	38.34	1.00e-60	226.00
IUUC-Ppe-101942	Prunus persica	48.45	0.00e+00	760.00
IUUC-Sit-109825	Setaria italica	42.81	0.00e+00	638.00
IUUC-Sly-111027	Solanum lycopersicum	56.44	0.00e+00	662.00
IUUC-Sbi-114225	Sorghum bicolor	44.86	2.00e-178	619.00
IUUC-Vvi-131600	Vitis vinifera	50.17	0.00e+00	773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence