iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000178

Ensembl Protein ID

EMT32422

UniProt Accession

M8CXJ7; M8CXJ7_AEGTA

Genbank Protein ID

EMT32422.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD501883

Gene Name

F775_19480

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_19480	EMT32422	EMT32422

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.9	75	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++ +   +++ p C+H fh++Cl  w       +k+ +CP+Cr
   Q: 75   CSICLGEYTEKelLRIIPtCQHNFHRTCLDLW------LQKQTTCPICR 117
           ********44334778889*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MPAVFGAVVC ARFICCRARG VDDGAPTPVD FDVDFPADLE RPVEDANCGL EPLVIAAIPI 60
MKYSEALYSK DDAQCSICLG EYTEKELLRI IPTCQHNFHR TCLDLWLQKQ TTCPICRVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGCGG TCTTCGGCGC GGTCGTCTGC GCGCGGTTCA TCTGCTGCCG CGCCCGGGGC 60
GTGGACGACG GCGCCCCGAC GCCGGTGGAC TTTGACGTTG ACTTCCCGGC AGATCTCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_19480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014804	Brachypodium distachyon	70.73	2.00e-48	184.00
IUUC-Bol-015952	Brassica oleracea	43.82	8.00e-19	86.70
IUUC-Ete-033153	Echinops telfairi	45.76	6.00e-11	62.40
IUUC-Fal-037463	Ficedula albicollis	47.27	6.00e-09	55.80
IUUC-Gma-043419	Glycine max	43.90	8.00e-27	112.00
IUUC-Hvu-047427	Hordeum vulgare	90.18	1.00e-70	258.00
IUUC-Lpe-051221	Leersia perrieri	58.87	8.00e-46	175.00
IUUC-Mtr-057883	Medicago truncatula	40.48	7.00e-30	122.00
IUUC-Mac-064952	Musa acuminata	44.20	3.00e-35	140.00
IUUC-Oba-075242	Oryza barthii	62.14	1.00e-46	178.00
IUUC-Obr-076776	Oryza brachyantha	61.19	3.00e-44	170.00
IUUC-Ogl-076928	Oryza glaberrima	62.14	1.00e-46	178.00
IUUC-Ogu-078449	Oryza glumaepatula	60.71	3.00e-45	173.00
IUUC-Oin-079044	Oryza indica	62.14	1.00e-46	178.00
IUUC-Olo-080843	Oryza longistaminata	62.86	5.00e-47	179.00
IUUC-Ome-081251	Oryza meridionalis	62.14	2.00e-46	177.00
IUUC-Oni-082577	Oryza nivara	62.14	1.00e-46	178.00
IUUC-Opu-084095	Oryza punctata	62.14	3.00e-45	173.00
IUUC-Oru-084932	Oryza rufipogon	60.14	5.00e-46	176.00
IUUC-Osa-085850	Oryza sativa	62.04	4.00e-45	173.00
IUUC-Ppa-095233	Physcomitrella patens	37.68	5.00e-18	84.70
IUUC-Ppe-102002	Prunus persica	46.50	5.00e-34	136.00
IUUC-Sit-110733	Setaria italica	62.59	3.00e-43	168.00
IUUC-Sly-110894	Solanum lycopersicum	41.03	2.00e-29	120.00
IUUC-Stu-112119	Solanum tuberosum	41.03	2.00e-29	120.00
IUUC-Tgu-116568	Taeniopygia guttata	47.27	5.00e-09	55.50
IUUC-Tae-123118	Triticum aestivum	98.15	5.00e-93	332.00
IUUC-Tur-126495	Triticum urartu	93.79	1.00e-88	318.00
IUUC-Vvi-131137	Vitis vinifera	48.41	4.00e-36	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence