iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080910

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539923.1_FG004	KN539923.1_FGT004	KN539923.1_FGP004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-08	33.9	56	98

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++  k+ ++++p C H fh++C+  w       +k+ +CP+Cr
   Q: 56   CSICLGEYneKEILRIMPkCRHNFHLSCIDVW------LQKQTTCPICR 98
           ********54333888999*************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAAGPAPFDF DIEFRAADLD RTIEHTRSGL EPFVVAAIPT MKYSYEAFQS KDDAQCSICL 60
GEYNEKEILR IMPKCRHNFH LSCIDVWLQK QTTCPICRIS LKDLPSGKPA ESPVRSLPQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCTG GCCCCGCGCC GTTCGACTTC GACATCGAGT TCCGGGCCGC GGATCTCGAC 60
CGCACGGTAA GATTTCTGTG CTCTACTCCG GTAATAACAT CATCTAGCGT TTAGCTGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001181	Aegilops tauschii	81.65	3.00e-49	187.00
IUUC-Bdi-014570	Brachypodium distachyon	82.44	2.00e-61	227.00
IUUC-Lpe-051361	Leersia perrieri	88.62	1.00e-62	231.00
IUUC-Oba-075171	Oryza barthii	95.97	4.00e-69	253.00
IUUC-Obr-076241	Oryza brachyantha	92.86	1.00e-68	251.00
IUUC-Ogu-078077	Oryza glumaepatula	95.97	4.00e-69	253.00
IUUC-Oin-079905	Oryza indica	95.97	4.00e-69	253.00
IUUC-Ome-081424	Oryza meridionalis	95.16	4.00e-69	253.00
IUUC-Oni-082602	Oryza nivara	95.97	4.00e-69	253.00
IUUC-Opu-083909	Oryza punctata	95.20	9.00e-69	251.00
IUUC-Oru-084703	Oryza rufipogon	96.00	9.00e-70	255.00
IUUC-Osa-085851	Oryza sativa	95.97	4.00e-69	253.00
IUUC-Tae-124617	Triticum aestivum	83.06	2.00e-58	217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence