iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006510

Ensembl Protein ID

scaffold_801982.1

UniProt Accession

D7MUA3; D7MUA3_ARALL

Genbank Protein ID

EFH42307.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_918582

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_801982.1	scaffold_801982.1	scaffold_801982.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-19	70.0	156	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt  vt++++  s  +ll+s++ D + +vW++
   Q: 156  GHTKAVTAIDWstSHvHLLASAGLDSVAYVWNV 188
           8**********9766899*************96 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLICNSYGN DSDDEPEPVS NERLTSEIAT APSIPSKRPY PVPEERQYKP PRRPYPPHGS 60
YSDPQTSSSV SVPVPVPVPG RYVSKRERSL LASVSTIPTQ DQSSDLNQKP SSSPTVLGSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGGTTCGA TTTCAAGTTT CCGATGGATC TTATTTGCAA TTCGTATGGC AATGACTCCG 60
ACGACGAACC TGAACCAGTG TCCAATGAGC GTTTAACATC TGAAATCGCC ACCGCACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_918582

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001588	Ailuropoda melanoleuca	35.78	2.00e-63	236.00
IUUC-Atr-003155	Amborella trichopoda	60.37	7.00e-130	456.00
IUUC-Apl-003544	Anas platyrhynchos	39.34	8.00e-55	205.00
IUUC-Ath-007329	Arabidopsis thaliana	92.12	0.00e+00	795.00
IUUC-Ame-010607	Astyanax mexicanus	38.64	8.00e-46	176.00
IUUC-Bta-013542	Bos taurus	35.46	5.00e-63	234.00
IUUC-Bdi-014736	Brachypodium distachyon	55.12	6.00e-122	430.00
IUUC-Bol-016112	Brassica oleracea	78.73	0.00e+00	713.00
IUUC-Bra-016685	Brassica rapa	77.85	0.00e+00	697.00
IUUC-Cja-018883	Callithrix jacchus	36.10	1.00e-63	237.00
IUUC-Cfa-021278	Canis familiaris	35.46	5.00e-63	234.00
IUUC-Cpo-022449	Cavia porcellus	34.91	4.00e-60	224.00
IUUC-Csa-023916	Chlorocebus sabaeus	35.78	3.00e-63	235.00
IUUC-Csv-026371	Ciona savignyi	26.32	5.00e-31	127.00
IUUC-Eca-033484	Equus caballus	36.42	2.00e-63	236.00
IUUC-Fca-035673	Felis catus	35.78	8.00e-64	237.00
IUUC-Fal-036795	Ficedula albicollis	36.31	7.00e-70	256.00
IUUC-Gmo-039062	Gadus morhua	36.50	6.00e-54	203.00
IUUC-Gga-040773	Gallus gallus	38.85	2.00e-63	234.00
IUUC-Gac-042364	Gasterosteus aculeatus	37.14	4.00e-59	220.00
IUUC-Gma-043100	Glycine max	53.19	7.00e-136	476.00
IUUC-Ggo-045220	Gorilla gorilla	35.78	3.00e-63	235.00
IUUC-Hsa-046511	Homo sapiens	35.78	5.00e-63	234.00
IUUC-Hvu-047431	Hordeum vulgare	56.89	6.00e-117	412.00
IUUC-Lch-049590	Latimeria chalumnae	38.93	9.00e-65	239.00
IUUC-Lpe-050810	Leersia perrieri	60.66	9.00e-91	326.00
IUUC-Loc-052196	Lepisosteus oculatus	35.09	3.00e-71	261.00
IUUC-Mcc-055622	Macaca mulatta	36.10	1.00e-63	236.00
IUUC-Mtr-058041	Medicago truncatula	63.77	3.00e-131	460.00
IUUC-Mga-060149	Meleagris gallopavo	38.76	2.00e-54	204.00
IUUC-Mmr-061552	Microcebus murinus	35.78	5.00e-63	234.00
IUUC-Mdo-061969	Monodelphis domestica	36.31	1.00e-68	253.00
IUUC-Mmu-063343	Mus musculus	35.14	8.00e-62	230.00
IUUC-Mac-065079	Musa acuminata	57.07	2.00e-123	434.00
IUUC-Mpu-065949	Mustela putorius furo	34.78	5.00e-44	171.00
IUUC-Ont-072361	Oreochromis niloticus	37.35	5.00e-66	244.00
IUUC-Oba-075367	Oryza barthii	57.34	1.00e-117	415.00
IUUC-Obr-076738	Oryza brachyantha	55.32	1.00e-116	412.00
IUUC-Ogu-078590	Oryza glumaepatula	57.34	9.00e-118	416.00
IUUC-Oin-079678	Oryza indica	57.18	5.00e-124	437.00
IUUC-Olo-080453	Oryza longistaminata	60.65	2.00e-105	374.00
IUUC-Ome-081794	Oryza meridionalis	56.49	4.00e-100	357.00
IUUC-Oni-082432	Oryza nivara	57.18	6.00e-124	436.00
IUUC-Opu-083897	Oryza punctata	57.45	3.00e-121	427.00
IUUC-Oru-085068	Oryza rufipogon	55.38	5.00e-114	403.00
IUUC-Osa-085805	Oryza sativa	57.18	5.00e-124	436.00
IUUC-Ola-087567	Oryzias latipes	38.70	3.00e-60	224.00
IUUC-Oga-088168	Otolemur garnettii	37.70	9.00e-65	240.00
IUUC-Oar-090158	Ovis aries	34.50	5.00e-56	211.00
IUUC-Pan-092157	Papio anubis	35.78	3.00e-63	235.00
IUUC-Psi-093817	Pelodiscus sinensis	38.01	1.00e-63	235.00
IUUC-Pma-094263	Petromyzon marinus	41.01	3.00e-41	160.00
IUUC-Ppa-095302	Physcomitrella patens	46.15	4.00e-103	367.00
IUUC-Pfo-097526	Poecilia formosa	35.26	4.00e-67	248.00
IUUC-Pab-098152	Pongo abelii	35.04	2.00e-51	196.00
IUUC-Pop-099987	Populus trichocarpa	60.11	4.00e-136	477.00
IUUC-Ppe-101575	Prunus persica	54.80	7.00e-136	476.00
IUUC-Pva-102942	Pteropus vampyrus	35.78	2.00e-62	233.00
IUUC-Rno-104857	Rattus norvegicus	35.46	8.00e-62	230.00
IUUC-Sha-106763	Sarcophilus harrisii	33.33	2.00e-70	259.00
IUUC-Sit-110488	Setaria italica	51.32	9.00e-121	426.00
IUUC-Sly-110893	Solanum lycopersicum	53.86	6.00e-129	453.00
IUUC-Stu-112566	Solanum tuberosum	54.53	4.00e-130	457.00
IUUC-Sar-113617	Sorex araneus	35.62	1.00e-26	113.00
IUUC-Sbi-114566	Sorghum bicolor	54.38	2.00e-120	424.00
IUUC-Tgu-117015	Taeniopygia guttata	36.31	9.00e-70	256.00
IUUC-Tca-121587	Theobroma cacao	63.13	2.00e-141	494.00
IUUC-Tae-123717	Triticum aestivum	56.00	3.00e-122	431.00
IUUC-Tur-126075	Triticum urartu	61.11	3.00e-51	195.00
IUUC-Tbe-127502	Tupaia belangeri	30.67	4.00e-41	161.00
IUUC-Ttr-129033	Tursiops truncatus	36.10	1.00e-63	236.00
IUUC-Vvi-131505	Vitis vinifera	63.56	8.00e-146	509.00
IUUC-Xtr-132851	Xenopus tropicalis	39.71	3.00e-54	203.00
IUUC-Xma-133463	Xiphophorus maculatus	36.05	1.00e-65	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence