iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081335

Ensembl Protein ID

OMERI08G12390.1

UniProt Accession

A0A0E0ELK6; A0A0E0ELK6_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI08G12390	OMERI08G12390.1	OMERI08G12390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.00e-16	59.5	45	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vpeeflCpIs+ +M dPv+lp G ty+r+++  +   g + cP   ++ +    +Pn +lr+ i  wc++++
   Q: 45   VPEEFLCPISGAPMADPVILPPGRTYERACVDAC--AGLSLCPPG-ASAAAAAAIPNDALRAAIRTWCARHG 113
           8********************************9..666679975.55569999***************997 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MGAPRARRWK LLLPPFHSAK RKPPLPPPPA PVAVAPAPGK EEEVVPEEFL CPISGAPMAD 60
PVILPPGRTY ERACVDACAG LSLCPPGASA AAAAAIPNDA LRAAIRTWCA RHGRAPPAPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGCTC CCCGCGCGCG GCGGTGGAAG CTTCTGCTCC CGCCCTTCCA CTCCGCCAAG 60
CGCAAGCCGC CGCTGCCGCC ACCGCCAGCG CCAGTGGCTG TGGCTCCGGC CCCGGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014768	Brachypodium distachyon	68.44	9.00e-76	276.00
IUUC-Hvu-047842	Hordeum vulgare	74.12	9.00e-82	296.00
IUUC-Lpe-050747	Leersia perrieri	68.07	6.00e-76	276.00
IUUC-Ogl-077581	Oryza glaberrima	94.72	6.00e-137	480.00
IUUC-Ogu-078609	Oryza glumaepatula	93.84	3.00e-135	474.00
IUUC-Oin-080137	Oryza indica	94.72	4.00e-137	480.00
IUUC-Olo-080764	Oryza longistaminata	95.67	8.00e-135	472.00
IUUC-Oni-082981	Oryza nivara	94.72	4.00e-137	480.00
IUUC-Oru-084602	Oryza rufipogon	96.18	3.00e-146	511.00
IUUC-Osa-086111	Oryza sativa	96.18	3.00e-146	511.00
IUUC-Sit-110542	Setaria italica	68.31	2.00e-69	256.00
IUUC-Sbi-114598	Sorghum bicolor	60.68	5.00e-50	191.00
IUUC-Tae-123396	Triticum aestivum	62.50	1.00e-106	379.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence