iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114598

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G130100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g020590	Sb07g020590.1	Sb07g020590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-11	43.7	57	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++CpI  ++M dPv+lpsG ty+r+++  + + g +             + q       +Pn +lr+ +  wc++++
   Q: 57   DFLCCPILRTPMADPVILPSGRTYERACVLACAELGLSlgpdgvvagDRGRDTQGGGVAAAIPNDALRAAVRTWCARSG 135
           45689***************************98887777756544322222222234567**************9875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGAERARRWR FLPFRSLSLP PPAASKPKNR PPPDVTVPPP PATKEKGEEE EGEVPADFLC 60
CPILRTPMAD PVILPSGRTY ERACVLACAE LGLSLGPDGV VAGDRGRDTQ GGGVAAAIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGCCG AGCGCGCGCG GCGCTGGAGG TTCCTTCCCT TCCGGTCGCT GTCTCTGCCA 60
CCGCCGGCAG CATCCAAGCC CAAGAACAGG CCGCCGCCGG ACGTCACTGT TCCTCCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_07g020590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014768	Brachypodium distachyon	63.14	4.00e-72	264.00
IUUC-Hvu-047842	Hordeum vulgare	61.41	5.00e-93	333.00
IUUC-Ogl-077581	Oryza glaberrima	64.22	1.00e-72	266.00
IUUC-Ogu-078609	Oryza glumaepatula	64.22	2.00e-72	265.00
IUUC-Oin-080137	Oryza indica	64.22	2.00e-72	266.00
IUUC-Olo-080764	Oryza longistaminata	63.55	3.00e-71	261.00
IUUC-Ome-081335	Oryza meridionalis	66.08	3.00e-73	268.00
IUUC-Oni-082981	Oryza nivara	64.22	2.00e-72	266.00
IUUC-Oru-084602	Oryza rufipogon	65.59	2.00e-80	292.00
IUUC-Osa-086111	Oryza sativa	65.59	2.00e-80	292.00
IUUC-Sit-110542	Setaria italica	69.87	2.00e-103	368.00
IUUC-Tae-123396	Triticum aestivum	61.78	2.00e-102	365.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence