iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121189

Ensembl Protein ID

EOY23974

UniProt Accession

A0A061GAA2; A0A061GAA2_THECC

Genbank Protein ID

EOY23974.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015695

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015695	EOY23974	EOY23974

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	31.2	143	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh +C+  w       + + +CPlCr
   Q: 143  CSVCLSEFqeDESLRLLPkCSHAFHVHCIDTW------LRSHSNCPLCR 185
           ********7655599999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGSIGNPRTW VPYMNTKDCS QGFCSLYCPQ WCYIIFPPPP PIEFPDDDSG PNFSPLVIAI 60
IGILASAFLL VSYYTIISKY CGNVDPSRRR ENHDPGEVLE DNHSPSVHEP WQTSTTGLDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGGAGCTT CATTTCACTA AGGTCAAGAA AATAAAGTGA TGAAAACAAG GATTATATTT 60
GACCCCAAAC CCTTGAAAAT ATTTGGTCTT GTGGCCTACC TTGGGAGACT GTGAGTATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	51.76	4.00e-88	317.00
IUUC-Bdi-014591	Brachypodium distachyon	41.54	6.00e-57	213.00
IUUC-Gma-042838	Glycine max	59.60	8.00e-98	349.00
IUUC-Hvu-047701	Hordeum vulgare	43.79	7.00e-64	236.00
IUUC-Lpe-051459	Leersia perrieri	39.95	2.00e-63	234.00
IUUC-Mtr-058411	Medicago truncatula	56.04	5.00e-97	347.00
IUUC-Mac-065580	Musa acuminata	48.80	1.00e-83	303.00
IUUC-Oba-075508	Oryza barthii	42.60	8.00e-65	239.00
IUUC-Obr-076311	Oryza brachyantha	40.89	9.00e-62	229.00
IUUC-Ogl-077079	Oryza glaberrima	41.79	4.00e-63	234.00
IUUC-Ogu-078315	Oryza glumaepatula	41.79	2.00e-63	235.00
IUUC-Oin-079821	Oryza indica	41.79	2.00e-63	235.00
IUUC-Olo-081066	Oryza longistaminata	42.72	3.00e-61	228.00
IUUC-Ome-081279	Oryza meridionalis	42.99	5.00e-58	217.00
IUUC-Oni-082586	Oryza nivara	40.10	1.00e-61	229.00
IUUC-Opu-083498	Oryza punctata	40.66	7.00e-66	243.00
IUUC-Oru-084696	Oryza rufipogon	41.79	1.00e-63	236.00
IUUC-Osa-086259	Oryza sativa	41.79	1.00e-63	236.00
IUUC-Ppa-095182	Physcomitrella patens	48.47	3.00e-32	132.00
IUUC-Pop-099671	Populus trichocarpa	68.98	1.00e-137	481.00
IUUC-Ppe-101720	Prunus persica	55.91	4.00e-95	340.00
IUUC-Smo-108989	Selaginella moellendorffii	43.24	1.00e-23	102.00
IUUC-Sit-109894	Setaria italica	43.44	2.00e-62	231.00
IUUC-Sly-110835	Solanum lycopersicum	50.40	9.00e-86	309.00
IUUC-Stu-112220	Solanum tuberosum	53.49	7.00e-89	319.00
IUUC-Sbi-114789	Sorghum bicolor	40.67	4.00e-62	231.00
IUUC-Tae-124557	Triticum aestivum	44.69	1.00e-59	223.00
IUUC-Tur-126697	Triticum urartu	70.59	3.00e-32	131.00
IUUC-Uma-129481	Ustilago maydis	48.94	1.00e-10	62.80
IUUC-Vda-129745	Verticillium dahliae	26.09	5.00e-10	56.20
IUUC-Vvi-131255	Vitis vinifera	60.78	7.00e-83	299.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence