iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048055

Ensembl Protein ID

ENSSTOP00000005841.2

UniProt Accession

I3M838; I3M838_ICTTR

Genbank Protein ID

ENSSTOP00000005841

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01111539

Gene Name

WDR20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000006544.2	ENSSTOT00000006532.2	ENSSTOP00000005841.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-12	47.1	257	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            c+++ +d +++v+G+ D  + vW++ +++
   Q: 257  LCVCWsPDgKYIVTGGEDDLVTVWSFVDCR 286
           6*****999****************88776 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MNEIKTQFTT REGLYKLLPH SEYSRPNRVP FNSQGSNPVR VSFVNLNDQS GNGDRLCFNV 60
GRELYFYIYK GVRKAADLSK PIDKRIYKGT QPTCHDFNHL TATAESVSLL VGFSAGQVQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCGAGCG CCGGGGACGG CGCCTGCGCG GTGGGCGTGA TCCGGGCACT TAGGGCAGGA 60
TGAACGCTGC TTTCCAAGAT GGCGACGGAG GGAGGAGGGA AGGAGATGAA CGAGATTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000844	Aegilops tauschii	34.48	6.00e-33	134.00
IUUC-Aml-001749	Ailuropoda melanoleuca	95.37	0.00e+00	1071.00
IUUC-Atr-002459	Amborella trichopoda	37.35	2.00e-54	206.00
IUUC-Apl-003710	Anas platyrhynchos	96.32	0.00e+00	951.00
IUUC-Aca-004914	Anolis carolinensis	95.59	0.00e+00	1092.00
IUUC-Aly-005833	Arabidopsis lyrata	36.74	1.00e-55	210.00
IUUC-Ath-006649	Arabidopsis thaliana	36.74	2.00e-55	210.00
IUUC-Acl-008348	Aspergillus clavatus	33.61	8.00e-57	214.00
IUUC-Afl-008642	Aspergillus flavus	29.84	4.00e-60	225.00
IUUC-Afu-008994	Aspergillus fumigatus	33.15	2.00e-53	203.00
IUUC-Ani-009266	Aspergillus nidulans	32.02	7.00e-53	201.00
IUUC-Ang-009614	Aspergillus niger	29.39	2.00e-58	219.00
IUUC-Aor-010159	Aspergillus oryzae	29.84	4.00e-60	225.00
IUUC-Ate-010476	Aspergillus terreus	34.68	6.00e-58	218.00
IUUC-Ame-010700	Astyanax mexicanus	88.68	0.00e+00	1048.00
IUUC-Bta-013293	Bos taurus	96.43	0.00e+00	1036.00
IUUC-Bdi-014283	Brachypodium distachyon	35.61	1.00e-50	194.00
IUUC-Bol-015990	Brassica oleracea	36.74	1.00e-54	206.00
IUUC-Bra-017842	Brassica rapa	23.13	5.00e-15	75.90
IUUC-Cel-018407	Caenorhabditis elegans	39.04	1.00e-120	427.00
IUUC-Cja-019007	Callithrix jacchus	94.25	0.00e+00	1144.00
IUUC-Cfa-020697	Canis familiaris	97.44	0.00e+00	719.00
IUUC-Cpo-022464	Cavia porcellus	90.07	0.00e+00	952.00
IUUC-Csa-023594	Chlorocebus sabaeus	99.46	0.00e+00	1151.00
IUUC-Cho-024294	Choloepus hoffmanni	97.56	2.00e-168	585.00
IUUC-Cin-025617	Ciona intestinalis	48.59	3.00e-85	308.00
IUUC-Csv-026120	Ciona savignyi	48.02	5.00e-53	199.00
IUUC-Cne-026940	Cryptococcus neoformans	27.11	1.00e-29	124.00
IUUC-Cme-027228	Cyanidioschyzon merolae	28.29	1.00e-20	95.50
IUUC-Dre-027892	Danio rerio	87.17	0.00e+00	1013.00
IUUC-Dno-029016	Dasypus novemcinctus	98.16	0.00e+00	1092.00
IUUC-Dor-030179	Dipodomys ordii	88.83	0.00e+00	986.00
IUUC-Dse-031362	Dothistroma septosporum	29.17	4.00e-45	175.00
IUUC-Dme-031790	Drosophila melanogaster	52.12	1.00e-108	387.00
IUUC-Eca-033704	Equus caballus	97.86	0.00e+00	914.00
IUUC-Eeu-034912	Erinaceus europaeus	82.49	0.00e+00	879.00
IUUC-Fca-036140	Felis catus	97.84	0.00e+00	1069.00
IUUC-Fal-037163	Ficedula albicollis	96.45	0.00e+00	1103.00
IUUC-Fso-038140	Fusarium solani	33.13	6.00e-53	201.00
IUUC-Gmo-039220	Gadus morhua	85.15	0.00e+00	1010.00
IUUC-Gga-040768	Gallus gallus	96.30	0.00e+00	1115.00
IUUC-Gac-042612	Gasterosteus aculeatus	88.08	0.00e+00	1044.00
IUUC-Gma-042694	Glycine max	35.56	2.00e-55	209.00
IUUC-Ggo-045322	Gorilla gorilla	94.08	0.00e+00	1144.00
IUUC-Hsa-046440	Homo sapiens	94.20	0.00e+00	1137.00
IUUC-Hvu-047057	Hordeum vulgare	31.10	1.00e-22	99.80
IUUC-Lch-049678	Latimeria chalumnae	93.43	0.00e+00	1090.00
IUUC-Lpe-051378	Leersia perrieri	36.09	2.00e-51	196.00
IUUC-Loc-051970	Lepisosteus oculatus	91.15	0.00e+00	1053.00
IUUC-Laf-053660	Loxodonta africana	98.04	0.00e+00	1108.00
IUUC-Mcc-055671	Macaca mulatta	98.16	0.00e+00	997.00
IUUC-Meu-056346	Macropus eugenii	97.35	0.00e+00	650.00
IUUC-Mtr-058649	Medicago truncatula	37.83	4.00e-56	212.00
IUUC-Mga-059701	Meleagris gallopavo	95.95	0.00e+00	960.00
IUUC-Mmr-060982	Microcebus murinus	94.20	0.00e+00	1137.00
IUUC-Mdo-062998	Monodelphis domestica	96.44	0.00e+00	1065.00
IUUC-Mmu-064199	Mus musculus	98.04	0.00e+00	1146.00
IUUC-Mac-065546	Musa acuminata	35.71	5.00e-52	198.00
IUUC-Mpu-066310	Mustela putorius furo	96.79	0.00e+00	1056.00
IUUC-Mlu-068216	Myotis lucifugus	96.96	0.00e+00	1097.00
IUUC-Nfi-068256	Neosartorya fischeri	33.89	2.00e-56	213.00
IUUC-Ncr-068904	Neurospora crassa	28.44	2.00e-56	213.00
IUUC-Nle-069233	Nomascus leucogenys	99.10	0.00e+00	1149.00
IUUC-Opr-071024	Ochotona princeps	97.48	0.00e+00	1035.00
IUUC-Ont-072202	Oreochromis niloticus	87.41	0.00e+00	1045.00
IUUC-Oan-073075	Ornithorhynchus anatinus	95.95	0.00e+00	959.00
IUUC-Ocu-073978	Oryctolagus cuniculus	98.92	0.00e+00	1148.00
IUUC-Oba-075973	Oryza barthii	35.26	3.00e-52	199.00
IUUC-Obr-076346	Oryza brachyantha	36.39	1.00e-51	197.00
IUUC-Ogl-077048	Oryza glaberrima	35.80	7.00e-51	194.00
IUUC-Ogu-078225	Oryza glumaepatula	35.26	7.00e-48	184.00
IUUC-Oin-079597	Oryza indica	35.69	6.00e-55	209.00
IUUC-Olo-080349	Oryza longistaminata	40.00	6.00e-23	101.00
IUUC-Oni-082556	Oryza nivara	35.26	4.00e-52	198.00
IUUC-Opu-083344	Oryza punctata	35.67	5.00e-54	204.00
IUUC-Oru-085085	Oryza rufipogon	35.21	3.00e-55	209.00
IUUC-Osa-085527	Oryza sativa	35.41	2.00e-54	206.00
IUUC-Ola-086647	Oryzias latipes	86.96	0.00e+00	1029.00
IUUC-Oga-088879	Otolemur garnettii	97.03	0.00e+00	1149.00
IUUC-Oar-089333	Ovis aries	95.68	0.00e+00	1009.00
IUUC-Ptr-090538	Pan troglodytes	93.73	0.00e+00	1136.00
IUUC-Pan-092473	Papio anubis	99.28	0.00e+00	1150.00
IUUC-Psi-094013	Pelodiscus sinensis	96.09	0.00e+00	1105.00
IUUC-Ppa-095812	Physcomitrella patens	37.22	1.00e-55	210.00
IUUC-Pfo-096913	Poecilia formosa	85.86	0.00e+00	956.00
IUUC-Pab-098503	Pongo abelii	99.10	0.00e+00	1148.00
IUUC-Pop-099670	Populus trichocarpa	36.51	6.00e-53	201.00
IUUC-Pca-100287	Procavia capensis	96.93	0.00e+00	1097.00
IUUC-Ppe-101841	Prunus persica	35.34	5.00e-55	208.00
IUUC-Pva-102826	Pteropus vampyrus	97.48	0.00e+00	1087.00
IUUC-Pgr-103681	Puccinia graminis	29.25	2.00e-33	137.00
IUUC-Rno-106076	Rattus norvegicus	98.02	0.00e+00	1139.00
IUUC-Sha-107220	Sarcophilus harrisii	96.10	0.00e+00	1064.00
IUUC-Sja-107886	Schizosaccharomyces japonicus	28.87	3.00e-36	146.00
IUUC-Smo-108846	Selaginella moellendorffii	38.37	7.00e-59	221.00
IUUC-Sit-109904	Setaria italica	34.75	6.00e-55	208.00
IUUC-Sly-111715	Solanum lycopersicum	35.88	7.00e-55	207.00
IUUC-Stu-112818	Solanum tuberosum	35.88	4.00e-55	208.00
IUUC-Sbi-114804	Sorghum bicolor	36.34	1.00e-53	204.00
IUUC-Ssc-116048	Sus scrofa	95.86	0.00e+00	1072.00
IUUC-Tgu-116514	Taeniopygia guttata	97.54	0.00e+00	969.00
IUUC-Tru-117529	Takifugu rubripes	86.85	0.00e+00	1033.00
IUUC-Tsy-119611	Tarsius syrichta	98.57	0.00e+00	1148.00
IUUC-Tni-120859	Tetraodon nigroviridis	88.44	0.00e+00	1003.00
IUUC-Tca-121339	Theobroma cacao	37.12	8.00e-56	211.00
IUUC-Tre-122206	Trichoderma reesei	30.93	1.00e-46	181.00
IUUC-Tvi-122377	Trichoderma virens	32.48	1.00e-46	180.00
IUUC-Tae-125238	Triticum aestivum	34.72	8.00e-51	194.00
IUUC-Tur-126428	Triticum urartu	31.31	6.00e-33	134.00
IUUC-Tme-126969	Tuber melanosporum	31.57	9.00e-59	221.00
IUUC-Tbe-127985	Tupaia belangeri	93.14	0.00e+00	982.00
IUUC-Ttr-128936	Tursiops truncatus	97.30	0.00e+00	1092.00
IUUC-Vda-129875	Verticillium dahliae	32.38	8.00e-52	197.00
IUUC-Vvi-131155	Vitis vinifera	37.65	2.00e-55	209.00
IUUC-Xtr-131864	Xenopus tropicalis	93.59	0.00e+00	1070.00
IUUC-Xma-133459	Xiphophorus maculatus	85.54	0.00e+00	978.00
IUUC-Zma-135634	Zea mays	36.62	7.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence