iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014664

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100825146; BRADI_1g77510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G77510	BRADI1G77510.1	BRADI1G77510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-28	95.7	424	457
UBD/Beta-Prp	8.60e-41	140.6	278	590

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H++ vtc++f   sd++++sGs Dg +++WD+r+
   Q: 424  HNNYVTCVQFqptSDNYFISGSIDGMVRIWDVRR 457
           999********9777****************986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......................................................... 44
           +hk+ i ++kfs d+++latg++dg ++vw+v +g                                                            
   Q: 278  AHKGAIVAMKFSYDGQYLATGGEDGAVRVWRVVEGERpdgldfaeddpscvfftvnenselapvnssegtkskqnksskgtadpacvviphrtfg 372
           79999999*****************************9*99999999999999999999999999999999999999999999999999999999 PP
   S: 45   .....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetl 133
                +++++gh++ + ++++s++g+ l+++s D+t+++w +  ++c+ +++ h+++v++++f+p s+++++sGs d ++r+wd++ + ++    
   Q: 373  isqvpVHEFYGHDDVILDLSWSKNGD-LLSASMDKTVRLWQVGCNSCLKVFS-HNNYVTCVQFQPtSDNYFISGSIDGMVRIWDVRRRLVVD--W 463
           99999999999999999999999996.9999999999999999999999999.999999999999555999999999999999999999998..8 PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl....tgghtdsvysls....fdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           ++++++v+ v++ pdg+  v G+  + +r +d + + l  +      g ++++ + ++      s+ k l+  s d++v++ d    +++  ++g
   Q: 464  ANTKEIVTAVCYRPDGKGAVVGTITGNCRYYDTSENHLELESqvslNGRKKSPLKRIIgfqyCPSDPKKLMVTSGDSQVRILDGV--HVISNYKG 556
           8888999999999999999999999999999997777765555555566666776666766544444999999999999999985..56999999 PP
   S: 221  ht.dnvksvrfspnderlvsgssDgsiriWdlrs 253
            + +   s  f+p++++++s+s+D si++W++ +
   Q: 557  LRsSSQGSASFTPDGDHIISASDDSSIYMWNYAN 590
           6525667788889999999999999999998644 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAREEEEGDE FFDSREVMSP ASVFSSPGSS GRHDEGADDC GGGDLLEVWV SGPCSSVHER 60
RQRFIRSLGL LDPGARPDEM PCSRTSAAVD DEEGIVLGSP AAELVSAAAV AGSADRDEEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGGG AGGAGGAGGA GGGGGACGAG TTCTTCGACT CAAGGGAGGT CATGTCGCCG 60
GCGTCGGTCT TCTCCTCGCC GGGGAGCTCC GGGCGGCACG ACGAGGGTGC CGACGACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

bdi:100825146

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	87.62	0.00e+00	873.00
IUUC-Atr-002755	Amborella trichopoda	45.55	2.00e-159	555.00
IUUC-Gma-042979	Glycine max	44.25	2.00e-154	538.00
IUUC-Hvu-047828	Hordeum vulgare	84.74	0.00e+00	939.00
IUUC-Lpe-051594	Leersia perrieri	75.85	0.00e+00	852.00
IUUC-Mtr-058554	Medicago truncatula	42.63	1.00e-150	526.00
IUUC-Mac-065324	Musa acuminata	47.98	7.00e-169	587.00
IUUC-Oba-075653	Oryza barthii	75.13	0.00e+00	951.00
IUUC-Obr-076256	Oryza brachyantha	78.90	0.00e+00	976.00
IUUC-Ogl-077818	Oryza glaberrima	78.28	0.00e+00	971.00
IUUC-Ogu-078138	Oryza glumaepatula	74.61	0.00e+00	953.00
IUUC-Oin-079480	Oryza indica	78.55	0.00e+00	972.00
IUUC-Olo-080838	Oryza longistaminata	78.82	0.00e+00	979.00
IUUC-Ome-081177	Oryza meridionalis	80.31	0.00e+00	1054.00
IUUC-Oni-082466	Oryza nivara	78.55	0.00e+00	972.00
IUUC-Opu-083616	Oryza punctata	79.78	0.00e+00	981.00
IUUC-Oru-084265	Oryza rufipogon	75.26	0.00e+00	956.00
IUUC-Osa-085283	Oryza sativa	78.42	0.00e+00	971.00
IUUC-Pop-099728	Populus trichocarpa	47.03	1.00e-164	572.00
IUUC-Sit-110689	Setaria italica	79.37	0.00e+00	1000.00
IUUC-Sly-111646	Solanum lycopersicum	40.27	1.00e-140	493.00
IUUC-Stu-112354	Solanum tuberosum	41.96	4.00e-142	498.00
IUUC-Sbi-114128	Sorghum bicolor	74.66	0.00e+00	996.00
IUUC-Tca-121635	Theobroma cacao	47.58	2.00e-171	595.00
IUUC-Tae-125734	Triticum aestivum	79.21	0.00e+00	1007.00
IUUC-Tur-126616	Triticum urartu	79.97	0.00e+00	919.00
IUUC-Vvi-130979	Vitis vinifera	48.29	6.00e-179	620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence