iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114128

Ensembl Protein ID

Sb01g049570.1

UniProt Accession

C5X116; C5X116_SORBI

Genbank Protein ID

EER95646.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G532700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g049570	Sb01g049570.1	Sb01g049570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-26	91.6	422	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H++ vtc++f   sd++++sG+ Dg +++WD+ 
   Q: 422  HNNYVTCIQFkptSDNYFISGCIDGMVRIWDIP 454
           999********9777****************75 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARFLGAGEE REEFFDSREV LSPASVSSSP SSSGRHDDGG WLFAQQLLEV WVRDPGSVHE 60
RRQRFVKSLG LLDPSPFGAR PGEETCSRPE ASEEILLASP SAELFSAAPT FASRGGEPTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTTGGTT GGTTCCCTTC TTGAGAGTTG CGAGAACCCC CGAAACCCAA CTGGGTACAT 60
CATCATCCAC CCCCCAAGGA GAGAGAGAGA GAGGAGGCAA GGGGCGGAGA GAGAGGAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g049570

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	80.00	0.00e+00	795.00
IUUC-Atr-002755	Amborella trichopoda	44.33	3.00e-168	584.00
IUUC-Ath-007681	Arabidopsis thaliana	46.72	3.00e-125	441.00
IUUC-Bdi-014664	Brachypodium distachyon	77.12	0.00e+00	1001.00
IUUC-Gma-042979	Glycine max	41.59	9.00e-156	543.00
IUUC-Hvu-047828	Hordeum vulgare	77.97	0.00e+00	854.00
IUUC-Lpe-051594	Leersia perrieri	72.28	0.00e+00	839.00
IUUC-Mtr-058554	Medicago truncatula	40.28	9.00e-149	519.00
IUUC-Mac-065324	Musa acuminata	47.03	2.00e-166	578.00
IUUC-Oba-075653	Oryza barthii	73.38	0.00e+00	925.00
IUUC-Obr-076256	Oryza brachyantha	76.94	0.00e+00	974.00
IUUC-Ogl-077818	Oryza glaberrima	76.62	0.00e+00	944.00
IUUC-Ogu-078138	Oryza glumaepatula	72.97	0.00e+00	928.00
IUUC-Oin-079480	Oryza indica	76.48	0.00e+00	943.00
IUUC-Olo-080838	Oryza longistaminata	77.18	0.00e+00	949.00
IUUC-Ome-081177	Oryza meridionalis	78.87	0.00e+00	1031.00
IUUC-Oni-082466	Oryza nivara	76.48	0.00e+00	943.00
IUUC-Opu-083616	Oryza punctata	77.08	0.00e+00	967.00
IUUC-Oru-084265	Oryza rufipogon	73.38	0.00e+00	928.00
IUUC-Osa-085283	Oryza sativa	76.34	0.00e+00	941.00
IUUC-Pop-099728	Populus trichocarpa	46.10	3.00e-168	584.00
IUUC-Ppe-101700	Prunus persica	51.78	6.00e-154	536.00
IUUC-Sit-110689	Setaria italica	88.30	0.00e+00	1180.00
IUUC-Sly-111162	Solanum lycopersicum	41.31	7.00e-146	510.00
IUUC-Stu-112019	Solanum tuberosum	40.93	3.00e-146	511.00
IUUC-Tca-121635	Theobroma cacao	46.19	1.00e-173	602.00
IUUC-Tae-125734	Triticum aestivum	70.96	0.00e+00	950.00
IUUC-Tur-126616	Triticum urartu	73.63	0.00e+00	845.00
IUUC-Vvi-131295	Vitis vinifera	44.18	1.00e-152	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence