iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s41030	POPTR_0001s41030.1	POPTR_0001s41030.1
POPTR_0001s41030	POPTR_0001s41030.3	POPTR_0001s41030.3
POPTR_0001s41030	POPTR_0001s41030.6	POPTR_0001s41030.6
POPTR_0001s41030	POPTR_0001s41030.5	POPTR_0001s41030.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-28	97.0	684	721

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           H+ +v++++f   d t+l+sGsdDg++k+W++ +gv++
   Q: 684  HERRVWSIDFssADpTMLASGSDDGSVKLWSINQGVSI 721
           999********9667****************9999875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRLFWLTCSP RGVTMEGSSE SAWQKSGSYR GFNTSVVTNR NLRSASYNSG FRKETDRVVL 60
ARQNLKNQAG TLSGVCEDEA AVDHFVQNME WNDVSLRHWL NKPERSVDEF ECLHIFRQIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTCTTT TGTGGAGGGG TTTTGTTTGA TTTTATTTTT GAAGTTGTGA GGGAAAAATG 60
AGGGAATTTA TGAGGCTGTA GTGTTTAGTG GAGTGTAGTA ACTAAAGTCT TGTTGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity

KEGG

pop:POPTR_0001s41030g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002923	Amborella trichopoda	60.02	0.00e+00	976.00
IUUC-Aly-005541	Arabidopsis lyrata	61.20	0.00e+00	978.00
IUUC-Ath-007626	Arabidopsis thaliana	63.11	0.00e+00	1006.00
IUUC-Bol-016003	Brassica oleracea	62.50	0.00e+00	981.00
IUUC-Bra-017508	Brassica rapa	63.03	0.00e+00	907.00
IUUC-Gma-043315	Glycine max	72.78	0.00e+00	1186.00
IUUC-Lpe-051099	Leersia perrieri	64.47	0.00e+00	768.00
IUUC-Mtr-058605	Medicago truncatula	70.18	0.00e+00	1191.00
IUUC-Mac-065222	Musa acuminata	55.01	0.00e+00	782.00
IUUC-Oba-075434	Oryza barthii	64.07	0.00e+00	780.00
IUUC-Obr-076666	Oryza brachyantha	65.24	0.00e+00	792.00
IUUC-Ogl-077203	Oryza glaberrima	64.75	0.00e+00	784.00
IUUC-Ogu-078753	Oryza glumaepatula	59.19	0.00e+00	735.00
IUUC-Oin-079226	Oryza indica	61.90	0.00e+00	741.00
IUUC-Olo-080700	Oryza longistaminata	63.32	0.00e+00	641.00
IUUC-Oni-082327	Oryza nivara	64.07	0.00e+00	781.00
IUUC-Opu-083945	Oryza punctata	64.93	0.00e+00	773.00
IUUC-Oru-085079	Oryza rufipogon	63.77	0.00e+00	777.00
IUUC-Osa-085666	Oryza sativa	59.83	1.00e-135	476.00
IUUC-Olu-087702	Ostreococcus lucimarinus	48.39	3.00e-79	287.00
IUUC-Ppe-101650	Prunus persica	75.00	0.00e+00	1298.00
IUUC-Sit-110040	Setaria italica	63.48	0.00e+00	738.00
IUUC-Sly-111108	Solanum lycopersicum	68.21	0.00e+00	1042.00
IUUC-Stu-112348	Solanum tuberosum	61.61	0.00e+00	941.00
IUUC-Sbi-114141	Sorghum bicolor	64.02	0.00e+00	782.00
IUUC-Tca-121705	Theobroma cacao	77.28	0.00e+00	1268.00
IUUC-Tae-125217	Triticum aestivum	63.97	0.00e+00	768.00
IUUC-Tur-126499	Triticum urartu	62.60	0.00e+00	728.00
IUUC-Vvi-131229	Vitis vinifera	69.83	0.00e+00	1123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence