iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-120470

Ensembl Protein ID

ENSTNIP00000009103.1

UniProt Accession

Q4SVD2; Q4SVD2_TETNG

Genbank Protein ID

CAF95400.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Genbank Nucleotide ID

CAAE01013763

Gene Name

eif3f; EIF3F; EIF3S5; GSTENG00012041001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000006342.1	ENSTNIT00000009274.1	ENSTNIP00000009103.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	79.93	4.00e-129	458.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Tetraodon nigroviridis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MSVYGPVVKI HPVVLASISD SYERRNEGAS RVIGTLLGTI DKHSIEVTNC FSVPHNESED 60
EVAVDMEFAK NMYELHKRVS PTEVIVGWYA TGFDITEHSV LIHEYYSREA SNPIHLTIDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGCCGGTT CTCGGTCCTT TCCAACATGT CGGTGTACGG ACCAGTTGTG AAAATTCACC 60
CAGTCGTTCT TGCTTCTATC TCCGACTCTT ATGAGAGGAG AAATGAGGGA GCGAGTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

tng:GSTEN00012041G001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	35.54	5.00e-47	181.00
IUUC-Aml-001527	Ailuropoda melanoleuca	80.15	6.00e-130	456.00
IUUC-Atr-002686	Amborella trichopoda	43.35	9.00e-54	203.00
IUUC-Apl-003977	Anas platyrhynchos	79.46	2.00e-107	380.00
IUUC-Aca-004335	Anolis carolinensis	79.55	3.00e-130	457.00
IUUC-Aly-005945	Arabidopsis lyrata	38.40	6.00e-52	197.00
IUUC-Ath-007045	Arabidopsis thaliana	38.78	1.00e-50	193.00
IUUC-Acl-008365	Aspergillus clavatus	34.43	1.00e-42	166.00
IUUC-Afl-008742	Aspergillus flavus	35.77	6.00e-42	164.00
IUUC-Afu-009030	Aspergillus fumigatus	34.43	1.00e-42	166.00
IUUC-Ani-009212	Aspergillus nidulans	35.04	6.00e-43	167.00
IUUC-Ang-009712	Aspergillus niger	34.31	5.00e-42	164.00
IUUC-Aor-009885	Aspergillus oryzae	35.77	8.00e-45	174.00
IUUC-Ate-010315	Aspergillus terreus	35.53	4.00e-41	161.00
IUUC-Ame-010801	Astyanax mexicanus	57.66	1.00e-76	279.00
IUUC-Bgr-011982	Blumeria graminis	33.33	6.00e-41	160.00
IUUC-Bta-012804	Bos taurus	80.30	2.00e-130	458.00
IUUC-Bci-013891	Botrytis cinerea	34.06	2.00e-36	146.00
IUUC-Bdi-014328	Brachypodium distachyon	38.78	1.00e-48	186.00
IUUC-Bol-015446	Brassica oleracea	38.40	8.00e-52	196.00
IUUC-Bra-016862	Brassica rapa	38.78	2.00e-52	198.00
IUUC-Cel-018171	Caenorhabditis elegans	35.31	2.00e-45	176.00
IUUC-Cja-019335	Callithrix jacchus	79.93	3.00e-130	457.00
IUUC-Cfa-020138	Canis familiaris	79.78	2.00e-129	454.00
IUUC-Cpo-022109	Cavia porcellus	70.96	4.00e-111	394.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	42.16	2.00e-64	238.00
IUUC-Csa-023994	Chlorocebus sabaeus	79.93	4.00e-130	457.00
IUUC-Cho-024351	Choloepus hoffmanni	60.67	7.00e-88	317.00
IUUC-Cin-025801	Ciona intestinalis	53.73	2.00e-85	308.00
IUUC-Csv-025805	Ciona savignyi	52.99	2.00e-83	302.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	30.55	7.00e-36	144.00
IUUC-Cne-026868	Cryptococcus neoformans	32.36	4.00e-33	134.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.73	1.00e-23	103.00
IUUC-Dre-028085	Danio rerio	88.28	5.00e-146	509.00
IUUC-Dno-030099	Dasypus novemcinctus	79.78	2.00e-129	455.00
IUUC-Dor-030324	Dipodomys ordii	72.08	3.00e-111	394.00
IUUC-Dse-031314	Dothistroma septosporum	35.16	6.00e-46	177.00
IUUC-Dme-031926	Drosophila melanogaster	47.29	1.00e-79	288.00
IUUC-Ete-032569	Echinops telfairi	73.98	6.00e-118	416.00
IUUC-Eca-033502	Equus caballus	77.32	2.00e-122	432.00
IUUC-Eeu-034883	Erinaceus europaeus	63.24	2.00e-61	228.00
IUUC-Fca-035873	Felis catus	80.15	8.00e-130	456.00
IUUC-Fal-036921	Ficedula albicollis	80.30	2.00e-131	461.00
IUUC-Fox-037765	Fusarium oxysporum	32.01	2.00e-31	129.00
IUUC-Fso-038240	Fusarium solani	33.09	3.00e-34	139.00
IUUC-Gmo-038864	Gadus morhua	90.84	2.00e-151	527.00
IUUC-Ggr-039862	Gaeumannomyces graminis	31.29	4.00e-32	131.00
IUUC-Gga-040952	Gallus gallus	80.30	4.00e-131	460.00
IUUC-Gac-041677	Gasterosteus aculeatus	91.94	2.00e-151	527.00
IUUC-Gma-043061	Glycine max	40.30	9.00e-51	193.00
IUUC-Ggo-045591	Gorilla gorilla	79.93	2.00e-130	458.00
IUUC-Hsa-046860	Homo sapiens	79.93	3.00e-130	457.00
IUUC-Hvu-047410	Hordeum vulgare	30.14	5.00e-21	92.80
IUUC-Itr-048211	Ictidomys tridecemlineatus	79.78	3.00e-129	454.00
IUUC-Lch-049410	Latimeria chalumnae	70.00	2.00e-83	301.00
IUUC-Lpe-051102	Leersia perrieri	40.00	2.00e-49	188.00
IUUC-Loc-052016	Lepisosteus oculatus	78.75	1.00e-125	442.00
IUUC-Lma-053157	Leptosphaeria maculans	35.53	1.00e-46	179.00
IUUC-Laf-054568	Loxodonta africana	79.55	9.00e-130	456.00
IUUC-Mcc-054613	Macaca mulatta	79.93	3.00e-130	457.00
IUUC-Meu-056832	Macropus eugenii	60.48	7.00e-68	249.00
IUUC-Mor-057104	Magnaporthe oryzae	30.39	1.00e-31	130.00
IUUC-Mtr-058445	Medicago truncatula	40.30	8.00e-61	226.00
IUUC-Mla-059038	Melampsora laricipopulina	32.07	3.00e-34	138.00
IUUC-Mga-059548	Meleagris gallopavo	80.08	9.00e-115	405.00
IUUC-Mvi-060520	Microbotryum violaceum	28.33	2.00e-24	106.00
IUUC-Mdo-062376	Monodelphis domestica	80.90	8.00e-131	459.00
IUUC-Mmu-063254	Mus musculus	79.78	4.00e-129	454.00
IUUC-Mac-065635	Musa acuminata	40.00	8.00e-54	203.00
IUUC-Mpu-066314	Mustela putorius furo	80.15	7.00e-130	456.00
IUUC-Mlu-067512	Myotis lucifugus	81.27	1.00e-130	459.00
IUUC-Nfi-068262	Neosartorya fischeri	34.43	1.00e-42	166.00
IUUC-Ncr-068872	Neurospora crassa	31.27	2.00e-33	136.00
IUUC-Nle-070118	Nomascus leucogenys	80.15	9.00e-130	456.00
IUUC-Opr-071228	Ochotona princeps	79.57	3.00e-113	400.00
IUUC-Ont-072600	Oreochromis niloticus	94.42	4.00e-153	533.00
IUUC-Oan-073584	Ornithorhynchus anatinus	80.08	3.00e-115	407.00
IUUC-Ocu-074542	Oryctolagus cuniculus	80.15	5.00e-130	457.00
IUUC-Oba-075923	Oryza barthii	39.54	1.00e-50	192.00
IUUC-Obr-076313	Oryza brachyantha	40.00	2.00e-50	192.00
IUUC-Ogl-076932	Oryza glaberrima	39.54	1.00e-50	192.00
IUUC-Ogu-078152	Oryza glumaepatula	39.54	1.00e-50	192.00
IUUC-Oin-079528	Oryza indica	39.54	1.00e-50	192.00
IUUC-Olo-080401	Oryza longistaminata	39.54	1.00e-50	192.00
IUUC-Ome-081553	Oryza meridionalis	39.92	5.00e-51	194.00
IUUC-Oni-082090	Oryza nivara	39.54	1.00e-50	192.00
IUUC-Opu-083583	Oryza punctata	40.00	7.00e-50	190.00
IUUC-Oru-084492	Oryza rufipogon	39.54	1.00e-50	192.00
IUUC-Osa-085383	Oryza sativa	39.54	1.00e-50	192.00
IUUC-Ola-086835	Oryzias latipes	91.94	2.00e-152	530.00
IUUC-Olu-087716	Ostreococcus lucimarinus	30.19	7.00e-32	130.00
IUUC-Oga-088886	Otolemur garnettii	80.52	1.00e-130	459.00
IUUC-Oar-090079	Ovis aries	80.30	1.00e-130	458.00
IUUC-Ptr-091457	Pan troglodytes	79.93	4.00e-130	457.00
IUUC-Pan-092317	Papio anubis	77.30	1.00e-82	298.00
IUUC-Psi-093129	Pelodiscus sinensis	76.83	7.00e-119	419.00
IUUC-Pma-094488	Petromyzon marinus	76.56	2.00e-128	451.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.53	1.00e-46	179.00
IUUC-Ppa-095341	Physcomitrella patens	42.70	1.00e-66	246.00
IUUC-Pfo-096286	Poecilia formosa	92.31	1.00e-152	531.00
IUUC-Pab-097765	Pongo abelii	79.93	4.00e-130	457.00
IUUC-Pop-099131	Populus trichocarpa	40.68	1.00e-56	213.00
IUUC-Pca-100524	Procavia capensis	67.09	3.00e-87	313.00
IUUC-Ppe-101934	Prunus persica	40.68	2.00e-61	228.00
IUUC-Pva-102577	Pteropus vampyrus	80.90	9.00e-131	459.00
IUUC-Pgr-103521	Puccinia graminis	30.94	3.00e-34	138.00
IUUC-Pte-104304	Pyrenophora teres	35.53	2.00e-46	179.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.53	2.00e-46	179.00
IUUC-Rno-105717	Rattus norvegicus	79.78	3.00e-129	454.00
IUUC-Sha-107190	Sarcophilus harrisii	81.61	2.00e-128	451.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	35.36	1.00e-46	179.00
IUUC-Spo-108355	Schizosaccharomyces pombe	36.88	2.00e-47	182.00
IUUC-Smo-109374	Selaginella moellendorffii	44.81	3.00e-69	254.00
IUUC-Sit-110119	Setaria italica	39.54	9.00e-51	193.00
IUUC-Sly-111570	Solanum lycopersicum	38.33	5.00e-50	190.00
IUUC-Stu-112308	Solanum tuberosum	40.68	1.00e-56	212.00
IUUC-Sar-113515	Sorex araneus	73.40	3.00e-38	150.00
IUUC-Sbi-114605	Sorghum bicolor	39.16	1.00e-50	193.00
IUUC-Sre-114906	Sporisorium reilianum	42.34	7.00e-57	213.00
IUUC-Tgu-117087	Taeniopygia guttata	78.81	2.00e-112	397.00
IUUC-Tru-117700	Takifugu rubripes	95.24	2.00e-155	540.00
IUUC-Tca-121109	Theobroma cacao	39.92	4.00e-50	191.00
IUUC-Tre-122095	Trichoderma reesei	33.94	3.00e-34	139.00
IUUC-Tvi-122580	Trichoderma virens	33.57	1.00e-33	136.00
IUUC-Tae-125129	Triticum aestivum	38.78	2.00e-51	195.00
IUUC-Tur-126658	Triticum urartu	33.33	1.00e-43	169.00
IUUC-Tme-127043	Tuber melanosporum	36.40	3.00e-47	181.00
IUUC-Tbe-127927	Tupaia belangeri	80.15	8.00e-130	456.00
IUUC-Ttr-129231	Tursiops truncatus	80.52	3.00e-130	457.00
IUUC-Uma-129578	Ustilago maydis	41.97	2.00e-55	208.00
IUUC-Vda-129730	Verticillium dahliae	31.88	9.00e-39	154.00
IUUC-Vpa-130677	Vicugna pacos	47.41	5.00e-27	114.00
IUUC-Vvi-130968	Vitis vinifera	41.44	4.00e-57	214.00
IUUC-Xtr-132203	Xenopus tropicalis	80.00	1.00e-130	458.00
IUUC-Xma-133972	Xiphophorus maculatus	91.21	2.00e-151	527.00
IUUC-Yli-134553	Yarrowia lipolytica	36.86	4.00e-44	171.00
IUUC-Zma-134941	Zea mays	40.38	5.00e-47	181.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence