iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133972

Ensembl Protein ID

ENSXMAP00000005923.1

UniProt Accession

M3ZUN0; M3ZUN0_XIPMA

Genbank Protein ID

ENSXMAP00000005923

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Genbank Nucleotide ID

AGAJ01003234

Gene Name

eif3f; EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000005886.1	ENSXMAT00000005929.1	ENSXMAP00000005923.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	78.81	2.00e-128	456.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xiphophorus maculatus

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MSVFGPVVKI HPVVLASICD SYERRNEGAS RVIGTILGII DKHSIEVTNC FSVPHNESED 60
EVAVDMEFAK NMYELHKRVS PTEVIIGWYA TGFDITEHSV LIHEYYSREA TNPIHLTVDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATTAA AAAATATTAC TGTAAAATAA AATAAAGTAT TATCTTATTA TCTTTAAACG 60
TGCAACTCTC CAAATAAGAT TAAGAGACTG TGAATAGTAG TGTTGGTTCC CCTCGTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

xma:102235202

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	35.52	3.00e-47	182.00
IUUC-Aml-001527	Ailuropoda melanoleuca	79.03	4.00e-129	454.00
IUUC-Atr-002686	Amborella trichopoda	42.59	7.00e-53	200.00
IUUC-Apl-003977	Anas platyrhynchos	80.36	1.00e-109	389.00
IUUC-Aca-004335	Anolis carolinensis	78.07	2.00e-128	451.00
IUUC-Aly-005945	Arabidopsis lyrata	38.40	2.00e-51	196.00
IUUC-Ath-007045	Arabidopsis thaliana	38.40	8.00e-50	190.00
IUUC-Acl-008365	Aspergillus clavatus	34.31	1.00e-40	160.00
IUUC-Afl-008742	Aspergillus flavus	35.77	5.00e-40	158.00
IUUC-Afu-009030	Aspergillus fumigatus	34.31	8.00e-41	160.00
IUUC-Ani-009212	Aspergillus nidulans	35.04	3.00e-41	162.00
IUUC-Ang-009712	Aspergillus niger	34.31	3.00e-40	159.00
IUUC-Aor-009885	Aspergillus oryzae	35.77	1.00e-42	166.00
IUUC-Ate-010315	Aspergillus terreus	35.40	3.00e-39	155.00
IUUC-Ame-010801	Astyanax mexicanus	55.47	5.00e-75	274.00
IUUC-Bgr-011982	Blumeria graminis	32.61	1.00e-39	156.00
IUUC-Bta-012804	Bos taurus	79.18	9.00e-130	456.00
IUUC-Bci-013891	Botrytis cinerea	34.30	7.00e-38	151.00
IUUC-Bdi-014328	Brachypodium distachyon	38.78	5.00e-49	187.00
IUUC-Bol-015446	Brassica oleracea	38.78	6.00e-52	197.00
IUUC-Bra-016862	Brassica rapa	39.16	2.00e-52	199.00
IUUC-Cel-018171	Caenorhabditis elegans	32.52	5.00e-43	167.00
IUUC-Cja-019335	Callithrix jacchus	78.81	3.00e-129	454.00
IUUC-Cfa-020138	Canis familiaris	78.65	2.00e-128	452.00
IUUC-Cpo-022109	Cavia porcellus	69.71	4.00e-110	390.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	43.28	3.00e-66	244.00
IUUC-Csa-023994	Chlorocebus sabaeus	78.81	3.00e-129	454.00
IUUC-Cho-024351	Choloepus hoffmanni	60.30	2.00e-88	319.00
IUUC-Cin-025801	Ciona intestinalis	54.48	2.00e-85	309.00
IUUC-Csv-025805	Ciona savignyi	53.36	1.00e-83	302.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	28.62	5.00e-34	138.00
IUUC-Cne-026868	Cryptococcus neoformans	33.82	6.00e-33	134.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.73	9.00e-22	97.40
IUUC-Dre-028085	Danio rerio	88.28	2.00e-145	508.00
IUUC-Dno-030099	Dasypus novemcinctus	78.65	1.00e-128	452.00
IUUC-Dor-030324	Dipodomys ordii	71.32	4.00e-111	394.00
IUUC-Dse-031314	Dothistroma septosporum	37.36	2.00e-46	179.00
IUUC-Dme-031926	Drosophila melanogaster	49.10	3.00e-81	295.00
IUUC-Ete-032569	Echinops telfairi	73.98	1.00e-117	415.00
IUUC-Eca-033502	Equus caballus	75.84	3.00e-121	427.00
IUUC-Eeu-034883	Erinaceus europaeus	61.62	4.00e-60	223.00
IUUC-Fca-035873	Felis catus	79.03	6.00e-129	453.00
IUUC-Fal-036921	Ficedula albicollis	79.55	2.00e-131	461.00
IUUC-Fox-037765	Fusarium oxysporum	30.58	6.00e-30	124.00
IUUC-Fso-038240	Fusarium solani	31.65	9.00e-33	134.00
IUUC-Gmo-038864	Gadus morhua	93.77	6.00e-154	536.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.86	2.00e-31	129.00
IUUC-Gga-040952	Gallus gallus	79.18	1.00e-130	458.00
IUUC-Gac-041677	Gasterosteus aculeatus	93.77	3.00e-154	537.00
IUUC-Gma-043061	Glycine max	39.16	2.00e-49	188.00
IUUC-Ggo-045591	Gorilla gorilla	78.81	2.00e-129	455.00
IUUC-Hsa-046860	Homo sapiens	78.81	3.00e-129	454.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	78.65	2.00e-128	452.00
IUUC-Lch-049410	Latimeria chalumnae	70.00	4.00e-85	307.00
IUUC-Lpe-051102	Leersia perrieri	39.22	6.00e-49	187.00
IUUC-Loc-052016	Lepisosteus oculatus	80.59	4.00e-127	447.00
IUUC-Lma-053157	Leptosphaeria maculans	35.53	3.00e-44	172.00
IUUC-Laf-054568	Loxodonta africana	78.44	9.00e-129	453.00
IUUC-Mcc-054613	Macaca mulatta	78.81	2.00e-129	455.00
IUUC-Meu-056832	Macropus eugenii	59.52	1.00e-67	248.00
IUUC-Mor-057104	Magnaporthe oryzae	30.04	3.00e-32	132.00
IUUC-Mtr-058445	Medicago truncatula	39.54	5.00e-60	224.00
IUUC-Mla-059038	Melampsora laricipopulina	30.80	2.00e-34	139.00
IUUC-Mga-059548	Meleagris gallopavo	79.24	2.00e-114	404.00
IUUC-Mvi-060520	Microbotryum violaceum	29.33	4.00e-24	105.00
IUUC-Mdo-062376	Monodelphis domestica	79.40	2.00e-129	455.00
IUUC-Mmu-063254	Mus musculus	79.03	2.00e-128	452.00
IUUC-Mac-065635	Musa acuminata	39.29	2.00e-54	206.00
IUUC-Mpu-066314	Mustela putorius furo	79.03	8.00e-129	453.00
IUUC-Mlu-067512	Myotis lucifugus	78.65	8.00e-128	449.00
IUUC-Nfi-068262	Neosartorya fischeri	34.31	9.00e-41	160.00
IUUC-Ncr-068872	Neurospora crassa	30.55	2.00e-33	136.00
IUUC-Nle-070118	Nomascus leucogenys	79.03	5.00e-129	454.00
IUUC-Opr-071228	Ochotona princeps	79.06	1.00e-112	398.00
IUUC-Ont-072600	Oreochromis niloticus	96.65	1.00e-155	541.00
IUUC-Oan-073584	Ornithorhynchus anatinus	79.66	8.00e-116	409.00
IUUC-Ocu-074542	Oryctolagus cuniculus	79.03	3.00e-129	454.00
IUUC-Oba-075923	Oryza barthii	38.78	2.00e-50	192.00
IUUC-Obr-076313	Oryza brachyantha	39.22	5.00e-50	191.00
IUUC-Ogl-076932	Oryza glaberrima	38.78	2.00e-50	192.00
IUUC-Ogu-078152	Oryza glumaepatula	38.78	2.00e-50	192.00
IUUC-Oin-079528	Oryza indica	38.78	2.00e-50	192.00
IUUC-Olo-080401	Oryza longistaminata	38.78	2.00e-50	192.00
IUUC-Ome-081553	Oryza meridionalis	39.16	8.00e-51	193.00
IUUC-Oni-082090	Oryza nivara	38.78	2.00e-50	192.00
IUUC-Opu-083583	Oryza punctata	39.22	1.00e-49	189.00
IUUC-Oru-084492	Oryza rufipogon	38.78	2.00e-50	192.00
IUUC-Osa-085383	Oryza sativa	38.78	2.00e-50	192.00
IUUC-Ola-086835	Oryzias latipes	93.77	3.00e-153	533.00
IUUC-Olu-087716	Ostreococcus lucimarinus	29.59	4.00e-31	127.00
IUUC-Oga-088886	Otolemur garnettii	79.40	2.00e-129	455.00
IUUC-Oar-090079	Ovis aries	79.18	7.00e-130	456.00
IUUC-Ptr-091457	Pan troglodytes	78.81	3.00e-129	454.00
IUUC-Pan-092317	Papio anubis	76.76	2.00e-82	298.00
IUUC-Psi-093129	Pelodiscus sinensis	74.90	2.00e-117	415.00
IUUC-Pma-094488	Petromyzon marinus	76.19	2.00e-128	451.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.53	1.00e-44	173.00
IUUC-Ppa-095341	Physcomitrella patens	42.70	2.00e-66	245.00
IUUC-Pfo-096286	Poecilia formosa	98.90	1.00e-160	558.00
IUUC-Pab-097765	Pongo abelii	78.81	3.00e-129	454.00
IUUC-Pop-099131	Populus trichocarpa	39.54	6.00e-56	210.00
IUUC-Pca-100524	Procavia capensis	66.24	5.00e-86	310.00
IUUC-Ppe-101934	Prunus persica	40.30	6.00e-61	227.00
IUUC-Pva-102577	Pteropus vampyrus	78.28	5.00e-128	450.00
IUUC-Pgr-103521	Puccinia graminis	29.64	5.00e-34	138.00
IUUC-Pte-104304	Pyrenophora teres	35.53	2.00e-44	172.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.53	1.00e-44	173.00
IUUC-Rno-105717	Rattus norvegicus	79.03	8.00e-129	453.00
IUUC-Sha-107190	Sarcophilus harrisii	80.08	4.00e-127	447.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	35.00	2.00e-45	176.00
IUUC-Spo-108355	Schizosaccharomyces pombe	36.17	4.00e-46	178.00
IUUC-Smo-109374	Selaginella moellendorffii	44.81	2.00e-68	251.00
IUUC-Sit-110119	Setaria italica	39.62	1.00e-50	192.00
IUUC-Sly-111570	Solanum lycopersicum	37.55	6.00e-51	194.00
IUUC-Stu-112308	Solanum tuberosum	38.82	1.00e-55	209.00
IUUC-Sar-113515	Sorex araneus	75.53	3.00e-39	154.00
IUUC-Sbi-114605	Sorghum bicolor	38.78	2.00e-50	192.00
IUUC-Sre-114906	Sporisorium reilianum	40.15	1.00e-55	209.00
IUUC-Tgu-117087	Taeniopygia guttata	78.39	2.00e-112	398.00
IUUC-Tru-117700	Takifugu rubripes	89.74	3.00e-150	523.00
IUUC-Tni-120470	Tetraodon nigroviridis	91.21	2.00e-151	527.00
IUUC-Tca-121109	Theobroma cacao	39.54	2.00e-49	189.00
IUUC-Tre-122095	Trichoderma reesei	33.09	2.00e-34	139.00
IUUC-Tvi-122580	Trichoderma virens	32.73	1.00e-33	137.00
IUUC-Tae-125129	Triticum aestivum	38.78	6.00e-52	197.00
IUUC-Tur-126658	Triticum urartu	33.70	6.00e-43	167.00
IUUC-Tme-127043	Tuber melanosporum	37.13	5.00e-47	181.00
IUUC-Tbe-127927	Tupaia belangeri	79.03	6.00e-129	453.00
IUUC-Ttr-129231	Tursiops truncatus	79.40	2.00e-129	455.00
IUUC-Uma-129578	Ustilago maydis	39.42	9.00e-54	203.00
IUUC-Vda-129730	Verticillium dahliae	30.07	1.00e-36	147.00
IUUC-Vpa-130677	Vicugna pacos	48.89	2.00e-28	119.00
IUUC-Vvi-130968	Vitis vinifera	40.68	2.00e-55	209.00
IUUC-Xtr-132203	Xenopus tropicalis	79.93	3.00e-130	457.00
IUUC-Yli-134553	Yarrowia lipolytica	36.50	2.00e-44	172.00
IUUC-Zma-134941	Zea mays	40.00	5.00e-47	181.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence