iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111186

Ensembl Protein ID

Solyc04g072890.2.1

UniProt Accession

K4BTS6; K4BTS6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g072890.2	Solyc04g072890.2.1	Solyc04g072890.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-08	35.0	309	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d ++l++G+ D t+++WD+r
   Q: 309  GHLDYSFSSAWhPDgRILATGNQDTTCRLWDIR 341
           89999*******99999**************76 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVDEYYDTTD FDDSTFGGES PRSTDPDISA DSEFEDDFEV RKSKLDTSAI EARNGKDIQG 60
IPWERLNFTR DKYRETRLKQ YKNYESLSRS REDLEKECKE VGKGHSFYDF QFNTRLVKST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGATG AGTACTATGA CACTACTGAT TTTGATGACA GCACTTTTGG GGGTGAATCG 60
CCGCGAAGTA CTGACCCGGA TATCTCTGCA GACTCGGAAT TTGAGGACGA TTTTGAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	57.67	2.00e-149	521.00
IUUC-Atr-002734	Amborella trichopoda	74.94	0.00e+00	683.00
IUUC-Aly-005521	Arabidopsis lyrata	67.65	5.00e-179	619.00
IUUC-Ath-007611	Arabidopsis thaliana	68.56	0.00e+00	630.00
IUUC-Bol-015183	Brassica oleracea	68.34	0.00e+00	636.00
IUUC-Bra-017403	Brassica rapa	68.26	0.00e+00	639.00
IUUC-Cme-027214	Cyanidioschyzon merolae	40.26	1.00e-52	201.00
IUUC-Gma-044288	Glycine max	73.37	0.00e+00	648.00
IUUC-Hvu-047718	Hordeum vulgare	62.78	2.00e-154	538.00
IUUC-Lpe-051582	Leersia perrieri	66.16	9.00e-164	568.00
IUUC-Mtr-058564	Medicago truncatula	74.31	0.00e+00	633.00
IUUC-Mac-065012	Musa acuminata	66.75	5.00e-166	577.00
IUUC-Obr-076093	Oryza brachyantha	63.64	2.00e-157	547.00
IUUC-Ogu-078133	Oryza glumaepatula	64.22	4.00e-161	560.00
IUUC-Oin-079185	Oryza indica	62.50	2.00e-156	545.00
IUUC-Olo-080502	Oryza longistaminata	58.44	4.00e-142	496.00
IUUC-Oni-082850	Oryza nivara	63.97	2.00e-160	558.00
IUUC-Osa-085692	Oryza sativa	59.59	1.00e-144	505.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	27.46	6.00e-45	175.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	35.34	7.00e-54	203.00
IUUC-Smo-109570	Selaginella moellendorffii	63.94	2.00e-160	557.00
IUUC-Sit-110668	Setaria italica	64.92	9.00e-156	541.00
IUUC-Stu-111950	Solanum tuberosum	97.14	0.00e+00	858.00
IUUC-Sbi-113990	Sorghum bicolor	64.35	1.00e-164	572.00
IUUC-Tca-121603	Theobroma cacao	66.67	1.00e-178	618.00
IUUC-Tae-123203	Triticum aestivum	61.24	4.00e-157	546.00
IUUC-Tur-126710	Triticum urartu	51.77	1.00e-139	488.00
IUUC-Vvi-131311	Vitis vinifera	74.03	0.00e+00	706.00
IUUC-Yli-134594	Yarrowia lipolytica	30.77	2.00e-41	162.00
IUUC-Zma-135500	Zea mays	56.01	5.00e-137	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence