iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-108005

Ensembl Protein ID

EEB09415

UniProt Accession

B6K7B1; B6K7B1_SCHJY

Genbank Protein ID

EEB09415.2

Protein Name

E3 ubiquitin-protein ligase ubr11

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_04619

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04619	EEB09415	EEB09415

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/N-recognin/UBR-box	8.30e-22	75.6	93	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/N-recognin/UBR-box

   S: 2    lCgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHeyklkksgg.ggfCdCGdteAwedgskCkkl 70
            Cg+vf+ ge +y+CrtC++d+t+vlC +Cf+++ H +He+++   ++  g+CdCGd+eAw+ +  C  +
   Q: 93   VCGHVFRNGEPVYRCRTCAMDNTCVLCARCFRNTNHDGHETHVSIPTDsNGICDCGDPEAWKVPLGCSIH 162
           7****************************************9998887589************9999887 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDVSSENDTA EYKAPERLLK FLVKNAERHQ YDFNDESASH LLQEVYMSLL NYDESNWKYL 60
VKEGPVSVTS KFRLPEVQKR QFGDEITDLG SEVCGHVFRN GEPVYRCRTC AMDNTCVLCA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCAGATGG ACGTGTCGTC GGAGAACGAC ACGGCTGAGT ATAAGGCTCC CGAGCGTCTG 60
CTCAAGTTTT TGGTGAAGAA CGCTGAACGG CACCAATACG ATTTCAATGA TGAATCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-016873	Brassica rapa	35.20	3.00e-17	83.20
IUUC-Csv-026033	Ciona savignyi	43.75	2.00e-11	59.30
IUUC-Meu-056204	Macropus eugenii	32.31	1.00e-19	90.90
IUUC-Oba-075295	Oryza barthii	42.72	1.00e-10	61.20
IUUC-Ogu-078497	Oryza glumaepatula	42.72	1.00e-10	61.20
IUUC-Olo-081056	Oryza longistaminata	42.72	1.00e-10	61.20
IUUC-Ome-081738	Oryza meridionalis	42.72	1.00e-10	61.20
IUUC-Osa-086106	Oryza sativa	42.72	9.00e-11	60.50
IUUC-Pop-099184	Populus trichocarpa	32.12	4.00e-11	60.50
IUUC-Vvi-130900	Vitis vinifera	40.78	3.00e-10	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence