iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080911

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN541675.1_FG002	KN541675.1_FGT002	KN541675.1_FGP002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-15	57.2	224	254
UBD/Beta-Prp	2.00e-40	139.4	109	267

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH d vtc++  +d ++l++Gs+D t+++W+
   Q: 224  GHMDCVTCVCShPDlPILLTGSNDETVRLWN 254
           8********878******************9 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstg.kcvhtlkghedsvlslsfsp..sgd 107
             k++l++g+ dg i+v+ ++++   +++++ h+  +t+++ +p++++ ++++  + ik wd ++g +c++ +     +v +++++   +++
   Q: 109  ARKQWLVVGYHDGFIRVYTYESPVQqVKRFKAHSWNITCLDVHPTEPYVLSVGLLDPIKMWDWNKGwECIRMFD---MQVSCVDYFTrgNQQ 197
           5799*****************9987799***********************************97747877777...99*******98888* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.........ktg 169
           ++++Gs d+t+r+wd ++++c++ +l gh++ v+cv++hpd  +l +Gs+D+tvrlW++         + g
   Q: 198  YIITGSLDKTARIWDCKSRTCVQ-ILIGHMDCVTCVCSHPDLPILLTGSNDETVRLWNSitfkvvighQAG 267
           ***********************.****************99***************98555555555444 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MTGKIIPMEN PDIPIDAHPT EPWILTGNIF ASVDILNCDT QIIPMENPDI PIDAHPTEPW 60
ILTGNIFGSV DILNCDTQNH LLSILKSSGN IVKFAYANEI HSSAAKLFAR KQWLVVGYHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTGGCA AGGTAATCAA TATTGTTACT GGCATGTTTT TTTTTAAAAA AATAAACCTA 60
GTGCTAAGTT CTTCATAAAG GCATAAAGTG GAATCATTTT ACTTTGGTAA ATGAAGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence