iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022953

Ensembl Protein ID

EDP08172

UniProt Accession

A8HVK4; A8HVK4_CHLRE

Genbank Protein ID

EDP08172.1

Protein Name

Ribosomal protein S27a

Genbank Nucleotide ID

DS496110

Gene Name

RPS27a; CHLREDRAFT_142065

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_142065	EDP08172	EDP08172

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	1.20e-15	56.7	1	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvk 72
           m+++v+t  +++  +evs+ +tv+++K+++++ +g+++ +q+++++G +L+D++ L e g++d+s+++++++
   Q: 1    MQIFVRT--DRTHLVEVSPAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAEAGVSDDSTLMCLLR 70
           8999999..56669*******************************************************987 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MQIFVRTDRT HLVEVSPAQT VADVKAAVEA LQGLEAGEQR ILFNGVQLED SQVLAEAGVS 60
DDSTLMCLLR LLGGAKKRKK KTYTKPKKQK HKHKKIKLRV LKFYKVDDSG KVQRLRKQCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGCAAGGA CGGCACTGTA ATCACTGCCT AGTACCGTCA GAATGCAGAT TTTCGTCCGG 60
ACTGGTGAGG CCGCCTTCGC TCTGCAAAAT CTCAGCTTCC TCTTGACAAT CGTCCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

cre:CHLREDRAFT_142065

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018630	Caenorhabditis elegans	50.68	2.00e-21	93.20
IUUC-Cne-026972	Cryptococcus neoformans	50.98	2.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence