iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106074

Ensembl Protein ID

ENSRNOP00000027780.6

UniProt Accession

F1LU69; F1LU69_RAT

Genbank Protein ID

ENSRNOP00000027780

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC094246

Gene Name

Rps27a-ps12; Ubbp4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000020492.7	ENSRNOT00000027780.7	ENSRNOP00000027780.6

Annotation

Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	1.50e-25	89.3	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++   pp+qq+L++aGk+L+  +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEETPPDQQRLVFAGKQLEGGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************985 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEETPPDQ QRLVFAGKQL EGGRTLSDYN 60
IQKESTLHLV LRLHGGAKKK SYTTPKKNKH KRKKVKLAVL KYYKVDENGK ISRLRRECPS 120

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Nucleotide Sequence
(Fasta)

ATGCAGATTT TTGTGAAGAC CCTTACAGGG AAGACCATCA CGCTCGAAGT TGAACCCTCG 60
GACACTATAG AAAATGTAAA GGCCAAGATC CAGGATAAGG AAGAAACTCC TCCTGATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence