iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131582

UUCD1 version

UUC-ViV-00443

Ensembl Protein ID

VIT_18s0089g01020.t01

UniProt Accession

F6GVX8; F6GVX8_VITVI

Genbank Protein ID

CCB44113.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594956

Gene Name

VIT_18s0089g01020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0089g01020	VIT_18s0089g01020.t01	VIT_18s0089g01020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	3.80e-07	30.8	365	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 97   gpdaglldrlpeeilveilkll.dkeellraarvcrrwqelasqkalwk 144
           + +   +++l+ ++lv++++++  +++ll + +vc++w++++ ++++w+
   Q: 365  QMEGRKWEELNRDCLVNVFQKVgMESMLLDVPLVCKSWHKASLDPKCWE 413
           44567899**************66777************9999999997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGGRKWEDLN MDCLVNVFHK VGIESLLLDV PRVCKSWHKA SLDPKCWESL IFPEDIRFLV 60
LDRRHRMRGI LAQIALHCNN FMRLSAPGIN VGYWEASAIV TLLPNLRYLV LKGATIRQKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGGAC GAAAGTGGGA GGACTTAAAC ATGGACTGTT TGGTGAATGT GTTTCACAAA 60
GTGGGGATAG AATCGTTGTT GTTGGATGTT CCCCGTGTAT GCAAGTCATG GCATAAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

Pfam

PF00646--F-box

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003025	Amborella trichopoda	40.00	5.00e-08	48.50
IUUC-Aly-005502	Arabidopsis lyrata	25.94	5.00e-13	68.60
IUUC-Bdi-014562	Brachypodium distachyon	24.72	3.00e-06	45.10
IUUC-Bol-015639	Brassica oleracea	21.89	1.00e-07	49.70
IUUC-Bra-016940	Brassica rapa	26.27	4.00e-09	54.70
IUUC-Csv-026124	Ciona savignyi	25.11	3.00e-07	48.10
IUUC-Gma-042978	Glycine max	23.50	5.00e-08	50.80
IUUC-Lpe-051562	Leersia perrieri	23.02	8.00e-09	56.60
IUUC-Oba-075397	Oryza barthii	25.66	7.00e-13	68.60
IUUC-Ogl-077479	Oryza glaberrima	21.62	1.00e-05	43.10
IUUC-Ogu-078375	Oryza glumaepatula	23.87	2.00e-06	46.60
IUUC-Oin-079411	Oryza indica	21.14	6.00e-05	40.80
IUUC-Olo-080767	Oryza longistaminata	31.08	3.00e-03	36.20
IUUC-Ome-081670	Oryza meridionalis	23.14	3.00e-08	52.40
IUUC-Oni-082405	Oryza nivara	23.35	3.00e-07	48.10
IUUC-Opu-083687	Oryza punctata	40.54	3.40e-02	33.90
IUUC-Oru-084494	Oryza rufipogon	23.35	3.00e-07	48.10
IUUC-Osa-085658	Oryza sativa	21.14	6.00e-05	40.80
IUUC-Ppe-101358	Prunus persica	23.14	2.00e-06	45.10
IUUC-Spo-108112	Schizosaccharomyces pombe	27.45	7.00e-04	38.10
IUUC-Sit-109906	Setaria italica	27.27	5.00e-13	67.40
IUUC-Sbi-114314	Sorghum bicolor	24.71	2.00e-10	58.90
IUUC-Tae-125132	Triticum aestivum	24.07	1.00e-07	50.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence