iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076007

Ensembl Protein ID

OB08G28030.1

UniProt Accession

J3MUM2; J3MUM2_ORYBR

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB08G28030	OB08G28030.1	OB08G28030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.80e-37	130.0	209	718

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           G+ NlgNtCY+N++LQcL+ + +lr  +            p+ p+g l + l++lf +     ++++  +p++ll + ++++++f+    q ++E+l
   Q: 209  GILNLGNTCYLNALLQCLLVLGKLRTWMCG----------PDAPSGILGEILRDLFVQTNkvGDTQGLLDPTTLLGCARMYESRFEDAFMQYSHELL 295
           999**************************9..........456889999999999999987789999****************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke........ 185
           +fl  + ee++         ++ ++        ++  +    +++i+ +F+gql+ ++ c++c  +s++++ f  ls+p+p + + +k         
   Q: 296  CFLRLDKEEKM---------TMPGNV-------QQHAPSAVVPTVIDSIFGGQLSVTTSCNRCLFKSVSQDVFHNLSVPLPPSGTLSKIvmspprnk 376
           ***88888888.........222222.......4567788899**************************************999887779******* PP
   S: 186  ................................................................................................. 185
                                                                                                            
   Q: 377  icvsvsqqslqlvpeidkastekfhtisdggeprfpaskledkfmmktsgplnldsnelelifpmedtvhaplwtptkkentqttsesdvektksvv 473
           ************************************************************************************************* PP
   S: 186  ................................................slqdcLesftkeeelegenkyycekck...................... 212
                                                           s+++cL+   k+e++e    ++ce+c                       
   Q: 474  ldnafsgpevsieaqmgifsadvttegtekaqncdivydetedinccpSIEECLKLHIKAEMIE----WKCENCSkvaqkassisgkdgeqtggdak 566
           ***************************************************************9....*******9999999999999999999999 PP
   S: 213  ........................................................................kkqe..........aekklklkklP 227
                                                                                   +             + k++ ++klP
   Q: 567  glscgeqdlspysipnktleclegdqedvprchlaeeqasllsgqcpnasiqgqergkqvnlghiaqqveenQ--YdrqdmkegegVIKSHLINKLP 661
           9999999999999999999999999999999999988888888888888888888877777777766655550..055566677779********** PP
   S: 228  evLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.sl 290
           +vL+++LkR         + k++ +v+f + Ld++pf+  ++ ++k++ +Y+L++vv H G  +
   Q: 662  PVLVIQLKRS------LGPLKVSGHVSFMEILDMEPFMDPSS-EDKDNSRYRLVGVVEHLGrRT 718
           **********......7789*********99*******9955.5567**************655 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MEEKRVRTGD RATTESPRKE KSPRMGAPPV MLDAGEPRCG METLPTFLEA DDSECGGAAS 60
LKVSGSRDTL IVAIRDTDGK QCEHMICTEH DMEEVVSKIA SSKGELMCED ETCLATGRHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGA AGAGGGTAAG GACGGGGGAT AGGGCTACCA CCGAGAGCCC GCGGAAAGAG 60
AAATCCCCGC GGATGGGAGC GCCGCCTGTG ATGCTGGATG CTGGTGAACC CAGATGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oin-079869	Oryza indica	49.74	7.00e-175	606.00
IUUC-Olo-080785	Oryza longistaminata	51.00	0.00e+00	648.00
IUUC-Oni-082965	Oryza nivara	50.57	0.00e+00	653.00
IUUC-Opu-083257	Oryza punctata	52.44	0.00e+00	655.00
IUUC-Oru-085230	Oryza rufipogon	50.70	0.00e+00	654.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence