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Tag Content
UUCD2 ID IUUC-Dre-028484
UUCD1 version UUC-DaR-01250
Ensembl Protein ID ENSDARP00000112905.1
UniProt Accession Q6P6Y4; Q6P6Y4_DANRE
Genbank Protein ID AAH61953.1
Protein Name RAB guanine nucleotide exchange factor (GEF) 1; Zgc:65944
Genbank Nucleotide ID AL935293
Gene Name rabgef1; zgc:65944
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000014430.9 ENSDART00000138243.2 ENSDARP00000112905.1
ENSDARG00000014430.9 ENSDART00000133421.1 ENSDARP00000120214.1
ENSDARG00000014430.9 ENSDART00000099827.4 ENSDARP00000090600.3
ENSDARG00000014430.9 ENSDART00000159273.1 ENSDARP00000141456.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/ZnF/ZnF_A20 1.50e-16 60.9 13 47
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/ZnF/ZnF_A20
   S: 1    dpskllCkkgCgfYGnpetngyCSkCyreelrrrr 35
           d+s+llCkkgCg+YGn++++g CSkC+r e++++r
   Q: 13   DQSELLCKKGCGYYGNAAWQGLCSKCWRDEYQKAR 47
           79******************************986 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MSQRSERRGI HVDQSELLCK KGCGYYGNAA WQGLCSKCWR DEYQKARQRQ IQDDWALAEK 60
LQREEEAAYV SSHSSSQTQP PQSHSQHSLA TFSKFEEKKT NEKTRKVTTV KKFFSPSSRT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028484|UBD,ZnF_A20|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCACCAGTC GCCTGGATAT GACGTCGTTG TGACCCGGAG AAGAGACCGC TGACGAGGTA 60
CACGTCCTCT GTATTAAGAT TAAACACTGT ATTTTGCCAT TCATCTCTTA AATATGTTGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028484|UBD,ZnF_A20|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR003123--VPS9
IPR002653--Znf_A20
PROSITE

PS51205--VPS9
PS51036--ZF_A20
Pfam

PF02204--VPS9
PF01754--zf-A20
SMART

SM00167--VPS9
SM00259--ZnF_A20
Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
KEGG dre:393816
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000198 Aegilops tauschii 31.14 4.00e-21 96.30
IUUC-Aml-001771 Ailuropoda melanoleuca 65.03 8.00e-157 547.00
IUUC-Atr-003154 Amborella trichopoda 32.81 2.00e-23 103.00
IUUC-Apl-004018 Anas platyrhynchos 66.80 0.00e+00 660.00
IUUC-Aca-004889 Anolis carolinensis 30.85 2.00e-08 54.30
IUUC-Aly-006138 Arabidopsis lyrata 34.25 2.00e-28 120.00
IUUC-Ath-006747 Arabidopsis thaliana 33.86 4.00e-28 119.00
IUUC-Ago-007776 Ashbya gossypii 27.78 1.00e-21 97.40
IUUC-Acl-008235 Aspergillus clavatus 30.88 6.00e-29 122.00
IUUC-Afl-008570 Aspergillus flavus 32.53 5.00e-32 133.00
IUUC-Afu-008815 Aspergillus fumigatus 30.57 3.00e-30 127.00
IUUC-Ani-009381 Aspergillus nidulans 31.58 3.00e-30 127.00
IUUC-Ang-009615 Aspergillus niger 31.58 5.00e-32 132.00
IUUC-Aor-010195 Aspergillus oryzae 32.18 3.00e-32 133.00
IUUC-Ate-010514 Aspergillus terreus 32.87 3.00e-31 130.00
IUUC-Ame-011365 Astyanax mexicanus 81.11 0.00e+00 818.00
IUUC-Bgr-012102 Blumeria graminis 31.69 2.00e-32 134.00
IUUC-Bta-013124 Bos taurus 67.13 0.00e+00 655.00
IUUC-Bci-013943 Botrytis cinerea 32.29 3.00e-31 130.00
IUUC-Bdi-014539 Brachypodium distachyon 34.65 3.00e-28 119.00
IUUC-Bol-016580 Brassica oleracea 37.74 5.00e-34 139.00
IUUC-Bra-017843 Brassica rapa 37.74 5.00e-34 139.00
IUUC-Cel-018199 Caenorhabditis elegans 29.96 2.00e-57 216.00
IUUC-Cja-019941 Callithrix jacchus 66.93 0.00e+00 650.00
IUUC-Cfa-020845 Canis familiaris 65.20 2.00e-167 582.00
IUUC-Cpo-022037 Cavia porcellus 67.59 0.00e+00 654.00
IUUC-Cre-022696 Chlamydomonas reinhardtii 27.65 1.00e-21 97.80
IUUC-Csa-023272 Chlorocebus sabaeus 70.10 0.00e+00 645.00
IUUC-Cho-025076 Choloepus hoffmanni 70.99 2.00e-136 479.00
IUUC-Cin-025400 Ciona intestinalis 45.33 3.00e-110 392.00
IUUC-Csv-025941 Ciona savignyi 40.49 1.00e-85 310.00
IUUC-Cgl-026725 Colletotrichum gloeosporioides 30.41 2.00e-28 121.00
IUUC-Cne-027057 Cryptococcus neoformans 32.12 4.00e-33 136.00
IUUC-Dno-028906 Dasypus novemcinctus 64.75 0.00e+00 647.00
IUUC-Dor-030124 Dipodomys ordii 60.12 1.00e-159 556.00
IUUC-Dse-031437 Dothistroma septosporum 30.74 3.00e-28 120.00
IUUC-Dme-031696 Drosophila melanogaster 34.07 5.00e-70 259.00
IUUC-Ete-032573 Echinops telfairi 68.60 9.00e-152 530.00
IUUC-Eca-033711 Equus caballus 65.54 0.00e+00 659.00
IUUC-Eeu-034459 Erinaceus europaeus 52.91 1.00e-52 201.00
IUUC-Fca-035447 Felis catus 66.73 0.00e+00 668.00
IUUC-Fal-036605 Ficedula albicollis 64.50 6.00e-180 624.00
IUUC-Fox-037967 Fusarium oxysporum 26.98 3.00e-19 90.90
IUUC-Fso-038110 Fusarium solani 28.14 1.00e-29 125.00
IUUC-Gmo-038785 Gadus morhua 74.80 0.00e+00 775.00
IUUC-Ggr-039760 Gaeumannomyces graminis 30.58 1.00e-28 121.00
IUUC-Gga-040584 Gallus gallus 67.52 0.00e+00 668.00
IUUC-Gac-042317 Gasterosteus aculeatus 74.80 0.00e+00 669.00
IUUC-Gma-044237 Glycine max 33.86 2.00e-26 114.00
IUUC-Ggo-044498 Gorilla gorilla 58.22 8.00e-155 540.00
IUUC-Hsa-046625 Homo sapiens 66.73 0.00e+00 649.00
IUUC-Hvu-047155 Hordeum vulgare 34.65 1.00e-28 120.00
IUUC-Itr-048753 Ictidomys tridecemlineatus 67.98 0.00e+00 656.00
IUUC-Kpa-049160 Komagataella pastoris 29.08 4.00e-25 110.00
IUUC-Lch-050529 Latimeria chalumnae 66.30 0.00e+00 736.00
IUUC-Lpe-051024 Leersia perrieri 35.04 3.00e-29 122.00
IUUC-Loc-052644 Lepisosteus oculatus 72.16 0.00e+00 711.00
IUUC-Lma-053102 Leptosphaeria maculans 31.13 2.00e-30 128.00
IUUC-Laf-054337 Loxodonta africana 66.93 0.00e+00 656.00
IUUC-Mcc-055659 Macaca mulatta 69.62 2.00e-140 492.00
IUUC-Meu-056084 Macropus eugenii 58.37 1.00e-70 261.00
IUUC-Mor-057255 Magnaporthe oryzae 29.50 9.00e-28 119.00
IUUC-Mpo-057454 Magnaporthe poae 30.58 2.00e-30 127.00
IUUC-Mtr-058098 Medicago truncatula 35.47 5.00e-33 135.00
IUUC-Mla-059068 Melampsora laricipopulina 32.69 2.00e-33 137.00
IUUC-Mga-059624 Meleagris gallopavo 58.21 0.00e+00 653.00
IUUC-Mvi-060282 Microbotryum violaceum 27.66 3.00e-23 104.00
IUUC-Mmr-061142 Microcebus murinus 67.72 0.00e+00 666.00
IUUC-Mdo-062289 Monodelphis domestica 70.50 0.00e+00 704.00
IUUC-Mmu-063961 Mus musculus 66.93 0.00e+00 652.00
IUUC-Mac-065188 Musa acuminata 33.59 3.00e-25 109.00
IUUC-Mpu-066291 Mustela putorius furo 64.55 0.00e+00 645.00
IUUC-Mlu-067431 Myotis lucifugus 64.55 0.00e+00 633.00
IUUC-Nfi-068422 Neosartorya fischeri 30.25 3.00e-31 130.00
IUUC-Ncr-068843 Neurospora crassa 30.31 8.00e-30 125.00
IUUC-Nle-069079 Nomascus leucogenys 70.50 0.00e+00 647.00
IUUC-Opr-070790 Ochotona princeps 64.10 7.00e-37 148.00
IUUC-Ont-071789 Oreochromis niloticus 77.01 0.00e+00 728.00
IUUC-Oan-072946 Ornithorhynchus anatinus 65.81 0.00e+00 631.00
IUUC-Ocu-073816 Oryctolagus cuniculus 67.13 0.00e+00 646.00
IUUC-Oba-075738 Oryza barthii 30.71 6.00e-19 89.00
IUUC-Obr-076355 Oryza brachyantha 35.66 2.00e-28 120.00
IUUC-Ogl-077592 Oryza glaberrima 32.16 6.00e-30 124.00
IUUC-Ogu-078197 Oryza glumaepatula 32.16 7.00e-30 124.00
IUUC-Oin-080047 Oryza indica 33.70 9.00e-28 118.00
IUUC-Olo-080317 Oryza longistaminata 32.16 1.00e-29 124.00
IUUC-Ome-081589 Oryza meridionalis 34.25 2.00e-28 120.00
IUUC-Oni-082700 Oryza nivara 30.40 4.00e-19 89.40
IUUC-Opu-083923 Oryza punctata 34.36 2.00e-20 93.20
IUUC-Oru-084318 Oryza rufipogon 30.40 4.00e-19 89.40
IUUC-Osa-086246 Oryza sativa 40.68 3.00e-07 46.20
IUUC-Ola-086334 Oryzias latipes 64.17 0.00e+00 644.00
IUUC-Olu-087719 Ostreococcus lucimarinus 34.38 2.00e-25 110.00
IUUC-Oga-088992 Otolemur garnettii 58.69 0.00e+00 648.00
IUUC-Oar-089789 Ovis aries 64.82 0.00e+00 648.00
IUUC-Ptr-091636 Pan troglodytes 66.73 0.00e+00 647.00
IUUC-Pan-092911 Papio anubis 70.30 0.00e+00 645.00
IUUC-Psi-093194 Pelodiscus sinensis 57.14 0.00e+00 641.00
IUUC-Pma-094212 Petromyzon marinus 46.67 1.00e-106 380.00
IUUC-Pno-094831 Phaeosphaeria nodorum 29.32 2.00e-30 128.00
IUUC-Ppa-095705 Physcomitrella patens 33.20 5.00e-32 132.00
IUUC-Pfo-096694 Poecilia formosa 73.77 0.00e+00 709.00
IUUC-Pab-097706 Pongo abelii 66.53 0.00e+00 646.00
IUUC-Pop-099891 Populus trichocarpa 34.72 8.00e-28 118.00
IUUC-Pca-100879 Procavia capensis 57.40 1.00e-61 229.00
IUUC-Ppe-101334 Prunus persica 35.83 1.00e-30 127.00
IUUC-Pva-103225 Pteropus vampyrus 63.39 7.00e-122 431.00
IUUC-Pgr-103564 Puccinia graminis 31.92 1.00e-30 128.00
IUUC-Ptt-103802 Puccinia triticina 30.45 4.00e-27 116.00
IUUC-Pte-104345 Pyrenophora teres 32.09 4.00e-30 127.00
IUUC-Pyt-104716 Pyrenophora triticirepentis 29.86 1.00e-30 129.00
IUUC-Rno-106101 Rattus norvegicus 67.13 0.00e+00 653.00
IUUC-Sce-106460 Saccharomyces cerevisiae 30.38 9.00e-25 108.00
IUUC-Sha-106919 Sarcophilus harrisii 59.58 0.00e+00 651.00
IUUC-Sja-107880 Schizosaccharomyces japonicus 33.33 6.00e-33 135.00
IUUC-Spo-108087 Schizosaccharomyces pombe 31.78 3.00e-30 126.00
IUUC-Ssl-108614 Sclerotinia sclerotiorum 30.43 7.00e-08 52.80
IUUC-Smo-109411 Selaginella moellendorffii 38.29 1.00e-27 117.00
IUUC-Sit-110678 Setaria italica 34.65 5.00e-29 122.00
IUUC-Sly-111526 Solanum lycopersicum 35.71 4.00e-28 119.00
IUUC-Stu-112494 Solanum tuberosum 35.32 1.00e-28 120.00
IUUC-Sar-112929 Sorex araneus 74.91 8.00e-124 437.00
IUUC-Sbi-114242 Sorghum bicolor 35.43 4.00e-32 132.00
IUUC-Sre-115224 Sporisorium reilianum 32.07 1.00e-28 122.00
IUUC-Ssc-115239 Sus scrofa 67.59 0.00e+00 652.00
IUUC-Tgu-117499 Taeniopygia guttata 66.34 0.00e+00 659.00
IUUC-Tru-118027 Takifugu rubripes 66.54 0.00e+00 647.00
IUUC-Tsy-119462 Tarsius syrichta 67.55 0.00e+00 642.00
IUUC-Tni-120855 Tetraodon nigroviridis 71.31 0.00e+00 668.00
IUUC-Tca-121213 Theobroma cacao 34.25 4.00e-28 119.00
IUUC-Tre-122186 Trichoderma reesei 31.25 1.00e-29 125.00
IUUC-Tvi-122541 Trichoderma virens 30.88 1.00e-28 121.00
IUUC-Tae-122942 Triticum aestivum 35.43 3.00e-29 123.00
IUUC-Tur-126572 Triticum urartu 35.27 4.00e-27 116.00
IUUC-Tme-127023 Tuber melanosporum 35.25 5.00e-33 136.00
IUUC-Tbe-127453 Tupaia belangeri 70.18 7.00e-162 564.00
IUUC-Ttr-128526 Tursiops truncatus 66.93 0.00e+00 651.00
IUUC-Uma-129660 Ustilago maydis 32.82 1.00e-29 125.00
IUUC-Vda-129737 Verticillium dahliae 29.51 5.00e-25 110.00
IUUC-Vpa-130505 Vicugna pacos 64.78 7.00e-147 513.00
IUUC-Vvi-131088 Vitis vinifera 34.25 1.00e-25 110.00
IUUC-Xtr-132799 Xenopus tropicalis 67.72 0.00e+00 641.00
IUUC-Xma-133345 Xiphophorus maculatus 73.43 0.00e+00 693.00
IUUC-Yli-134416 Yarrowia lipolytica 31.80 4.00e-32 132.00
IUUC-Zma-134750 Zea mays 34.25 2.00e-28 120.00
Created Date 25-Jun-2017

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