iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111787

Ensembl Protein ID

Solyc02g088570.1.1

UniProt Accession

K4BC12; K4BC12_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g088570.1	Solyc02g088570.1.1	Solyc02g088570.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-09	37.3	46	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+   +w     p l+ +   ++ CP+C+
   Q: 46   CPICWESFnivENVPYVLWCGHTLCKNCIlgLQWavvkfPTLPLQLPLFIACPWCN 101
           ********999999***************99999*********************7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MWNFASNCVA GNIGLKNEIL RRTQHSADGS DDETSSRTSR EEGLECPICW ESFNIVENVP 60
YVLWCGHTLC KNCILGLQWA VVKFPTLPLQ LPLFIACPWC NVLSLRLVYR GYLKFPRKNF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAATT TTGCATCCAA TTGTGTAGCT GGGAATATTG GGCTAAAGAA TGAGATTCTG 60
AGGCGTACTC AGCATTCAGC AGATGGCTCA GACGATGAAA CCTCTTCAAG AACCAGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

sly:101266380

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	59.33	1.00e-76	278.00
IUUC-Atr-002488	Amborella trichopoda	62.27	2.00e-87	314.00
IUUC-Aly-005618	Arabidopsis lyrata	61.57	7.00e-82	295.00
IUUC-Ath-007373	Arabidopsis thaliana	61.94	3.00e-83	300.00
IUUC-Bdi-014158	Brachypodium distachyon	64.04	4.00e-86	310.00
IUUC-Bol-016548	Brassica oleracea	60.29	4.00e-84	303.00
IUUC-Bra-017276	Brassica rapa	56.13	4.00e-83	300.00
IUUC-Gma-043252	Glycine max	71.64	6.00e-107	379.00
IUUC-Hvu-047109	Hordeum vulgare	60.82	3.00e-73	267.00
IUUC-Lpe-051412	Leersia perrieri	64.79	1.00e-89	321.00
IUUC-Mtr-057842	Medicago truncatula	69.78	1.00e-106	378.00
IUUC-Mac-064923	Musa acuminata	63.84	1.00e-74	271.00
IUUC-Oba-075020	Oryza barthii	64.79	8.00e-92	328.00
IUUC-Obr-076124	Oryza brachyantha	61.57	6.00e-83	299.00
IUUC-Ogl-077905	Oryza glaberrima	64.79	8.00e-92	328.00
IUUC-Ogu-078854	Oryza glumaepatula	64.79	7.00e-92	329.00
IUUC-Oin-079896	Oryza indica	64.42	1.00e-91	328.00
IUUC-Olo-080692	Oryza longistaminata	64.42	2.00e-91	327.00
IUUC-Oni-082962	Oryza nivara	64.79	7.00e-92	329.00
IUUC-Opu-084174	Oryza punctata	64.42	2.00e-90	324.00
IUUC-Oru-084363	Oryza rufipogon	64.42	4.00e-91	326.00
IUUC-Osa-085569	Oryza sativa	64.42	4.00e-91	326.00
IUUC-Ppa-096025	Physcomitrella patens	45.99	5.00e-50	190.00
IUUC-Pop-100053	Populus trichocarpa	75.84	1.00e-104	371.00
IUUC-Ppe-101521	Prunus persica	72.76	2.00e-105	374.00
IUUC-Smo-109392	Selaginella moellendorffii	39.67	4.00e-33	134.00
IUUC-Sit-109790	Setaria italica	64.18	1.00e-87	315.00
IUUC-Stu-112131	Solanum tuberosum	97.39	1.00e-155	541.00
IUUC-Sbi-114279	Sorghum bicolor	66.17	1.00e-86	311.00
IUUC-Tca-121818	Theobroma cacao	72.12	3.00e-93	333.00
IUUC-Tae-124848	Triticum aestivum	59.70	8.00e-72	262.00
IUUC-Tur-126036	Triticum urartu	61.57	3.00e-74	270.00
IUUC-Vvi-130901	Vitis vinifera	74.07	9.00e-100	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence