iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007409

UUCD1 version

UUC-ArT-00399

Ensembl Protein ID

AT5G48990.1

UniProt Accession

Q9FI71; FK121_ARATH

Genbank Protein ID

BAB10323.1; AED95753.1; AAL59896.1; AAM67490.1

Protein Name

F-box/kelch-repeat protein At5g48990

Genbank Nucleotide ID

AB017061; CP002688; AY072073; AY122957

Gene Name

At5g48990; K19E20.12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G48990	AT5G48990.1	AT5G48990.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	11516153

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.27	12.2	14	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 100  aglldrlpeeilveilklldkeellraarvcrrwqelasqkalwktvt 147
           ++   +lpe+++v+il +++++   +++ v+++++ +  +++l+kt t
   Q: 14   SSPNPSLPEDLIVSILARVSRSYYTNLSVVSKTFRSILTSPELYKTRT 61
           455668*****************************88877*9999876 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSPEKKRKK NQKSSPNPSL PEDLIVSILA RVSRSYYTNL SVVSKTFRSI LTSPELYKTR 60
TLLGKPETFL YVCLRFPDEA NPRWLILYRK PNQTLTKKKK KKEDSSVHLL APIPILNSPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGCAGTGA AGTGAGAGTG TCAAATCCCT AAATTCCTCC CTCCCTGCGT TTGTGTTATC 60
TGCAAGTCGG AGAAGAAGCA GAAGAAATCG ACTAATCTCT CGCCAATGTC GTCTCCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0880--Kelch repeat
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00256--FBOX

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G48990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006324	Arabidopsis lyrata	80.22	1.00e-168	585.00
IUUC-Ang-009828	Aspergillus niger	32.69	8.00e-01	27.30
IUUC-Bgr-012284	Blumeria graminis	27.87	9.00e-04	35.00
IUUC-Bci-013585	Botrytis cinerea	42.50	2.00e+00	27.70
IUUC-Bol-015238	Brassica oleracea	29.30	2.00e-37	149.00
IUUC-Lma-053301	Leptosphaeria maculans	26.83	1.40e-02	33.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence