iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBM	8.10e-27	92.4	696	723

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBM

   S: 1    lPsqvDpeVfsqLPeeiQeEvmaelrqq 28
           +Ps++Dp+Vf++LPee+Q+E+mae++++
   Q: 696  FPSDIDPQVFYELPEEVQRELMAEWKRA 723
           8*************************98 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGVEPEEEGG PAEEEDFSRA MEPSDSGAAG GSRAVCDQGA PSRIASSRVI VHVDLDCFYA 60
QVEMISNPEL KDKPLGVQQK YLVVTCNYEA RKLGVKKLMN VRDAKEKCPQ LVLVNGEDLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGAAGGGA AGATGGGGGT GGAGCCGGAG GAGGAAGGCG GCCCTGCGGA GGAAGAAGAC 60
TTTTCTCGTG CCATGGAGCC CTCGGACTCG GGGGCTGCGG GCGGCTCGCG GGGTGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017961--DNA_pol_Y-fam_little_finger
IPR024728--PolY_HhH_motif
IPR001126--UmuC

PROSITE

PS50173--UMUC

Pfam

PF00817--IMS
PF11799--IMS_C
PF11798--IMS_HHH

Gene Ontology

GO:0016607--C:nuclear speck
GO:0000932--C:P-body
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

KEGG

rno:291526

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002144	Ailuropoda melanoleuca	79.14	0.00e+00	1093.00
IUUC-Apl-003303	Anas platyrhynchos	58.81	4.00e-135	475.00
IUUC-Aca-004883	Anolis carolinensis	59.76	2.00e-162	565.00
IUUC-Acl-008010	Aspergillus clavatus	30.18	6.00e-46	178.00
IUUC-Afu-008874	Aspergillus fumigatus	29.80	1.00e-48	187.00
IUUC-Ani-009354	Aspergillus nidulans	29.55	2.00e-43	170.00
IUUC-Ang-009584	Aspergillus niger	29.61	9.00e-39	154.00
IUUC-Ate-010413	Aspergillus terreus	32.33	1.00e-48	187.00
IUUC-Bgr-012031	Blumeria graminis	30.37	1.00e-40	161.00
IUUC-Bta-012393	Bos taurus	75.69	0.00e+00	1014.00
IUUC-Bci-013960	Botrytis cinerea	31.96	6.00e-48	185.00
IUUC-Cja-019032	Callithrix jacchus	77.51	0.00e+00	1064.00
IUUC-Cfa-020560	Canis familiaris	78.63	0.00e+00	1105.00
IUUC-Cpo-021756	Cavia porcellus	68.91	0.00e+00	794.00
IUUC-Cre-022555	Chlamydomonas reinhardtii	46.45	2.00e-35	141.00
IUUC-Csa-023102	Chlorocebus sabaeus	80.36	0.00e+00	1063.00
IUUC-Cho-024983	Choloepus hoffmanni	69.20	3.00e-101	363.00
IUUC-Cgl-026717	Colletotrichum gloeosporioides	32.53	4.00e-51	196.00
IUUC-Cme-027310	Cyanidioschyzon merolae	31.52	3.00e-39	156.00
IUUC-Dre-027407	Danio rerio	59.32	6.00e-131	461.00
IUUC-Dno-029723	Dasypus novemcinctus	71.86	0.00e+00	953.00
IUUC-Dor-030274	Dipodomys ordii	70.68	0.00e+00	947.00
IUUC-Dse-031261	Dothistroma septosporum	31.96	3.00e-41	163.00
IUUC-Dme-031707	Drosophila melanogaster	41.18	1.00e-81	297.00
IUUC-Ete-032374	Echinops telfairi	68.67	4.00e-115	408.00
IUUC-Eca-034334	Equus caballus	77.10	0.00e+00	1058.00
IUUC-Eeu-034857	Erinaceus europaeus	79.27	8.00e-171	592.00
IUUC-Fca-036361	Felis catus	68.31	0.00e+00	956.00
IUUC-Fox-037933	Fusarium oxysporum	29.85	3.00e-45	176.00
IUUC-Fso-038328	Fusarium solani	31.59	6.00e-44	172.00
IUUC-Gmo-039026	Gadus morhua	49.88	3.00e-99	355.00
IUUC-Ggr-039773	Gaeumannomyces graminis	29.06	2.00e-38	153.00
IUUC-Gac-041577	Gasterosteus aculeatus	57.80	1.00e-132	466.00
IUUC-Ggo-045651	Gorilla gorilla	79.75	0.00e+00	1106.00
IUUC-Hsa-045715	Homo sapiens	80.54	0.00e+00	1102.00
IUUC-Itr-048408	Ictidomys tridecemlineatus	79.53	0.00e+00	1123.00
IUUC-Lch-050019	Latimeria chalumnae	55.32	1.00e-160	560.00
IUUC-Loc-052755	Lepisosteus oculatus	52.75	4.00e-139	488.00
IUUC-Lma-053204	Leptosphaeria maculans	30.16	3.00e-47	183.00
IUUC-Laf-053413	Loxodonta africana	76.34	0.00e+00	1037.00
IUUC-Mcc-055581	Macaca mulatta	80.21	0.00e+00	1074.00
IUUC-Meu-056476	Macropus eugenii	80.25	9.00e-73	267.00
IUUC-Mor-057059	Magnaporthe oryzae	35.02	5.00e-33	135.00
IUUC-Mpo-057505	Magnaporthe poae	31.52	2.00e-38	154.00
IUUC-Mmr-060808	Microcebus murinus	78.10	0.00e+00	1077.00
IUUC-Mdo-062650	Monodelphis domestica	74.78	0.00e+00	1036.00
IUUC-Mmu-063692	Mus musculus	86.86	0.00e+00	1266.00
IUUC-Mpu-065972	Mustela putorius furo	71.94	1.00e-129	455.00
IUUC-Mlu-067868	Myotis lucifugus	75.50	0.00e+00	1048.00
IUUC-Nfi-068273	Neosartorya fischeri	27.27	6.00e-38	152.00
IUUC-Nle-068968	Nomascus leucogenys	79.89	0.00e+00	1106.00
IUUC-Opr-070343	Ochotona princeps	66.24	0.00e+00	798.00
IUUC-Ont-071538	Oreochromis niloticus	51.81	1.00e-139	490.00
IUUC-Oan-073027	Ornithorhynchus anatinus	66.95	0.00e+00	912.00
IUUC-Ocu-074858	Oryctolagus cuniculus	77.94	0.00e+00	1076.00
IUUC-Ola-086502	Oryzias latipes	49.30	6.00e-143	501.00
IUUC-Oga-088433	Otolemur garnettii	75.75	0.00e+00	1019.00
IUUC-Oar-090109	Ovis aries	78.08	0.00e+00	1072.00
IUUC-Ptr-091289	Pan troglodytes	80.39	0.00e+00	1100.00
IUUC-Pan-092101	Papio anubis	79.86	0.00e+00	1124.00
IUUC-Psi-093115	Pelodiscus sinensis	55.04	0.00e+00	677.00
IUUC-Pno-094836	Phaeosphaeria nodorum	26.46	6.00e-30	125.00
IUUC-Pfo-096290	Poecilia formosa	50.96	3.00e-137	482.00
IUUC-Pab-098022	Pongo abelii	83.11	1.00e-180	626.00
IUUC-Pca-100696	Procavia capensis	66.20	0.00e+00	862.00
IUUC-Pva-102750	Pteropus vampyrus	85.67	0.00e+00	638.00
IUUC-Pte-104179	Pyrenophora teres	30.22	3.00e-40	159.00
IUUC-Sha-107266	Sarcophilus harrisii	68.75	1.00e-151	528.00
IUUC-Smo-109490	Selaginella moellendorffii	38.38	4.00e-54	204.00
IUUC-Sar-113566	Sorex araneus	60.73	0.00e+00	717.00
IUUC-Sre-114907	Sporisorium reilianum	34.56	1.00e-35	145.00
IUUC-Ssc-116055	Sus scrofa	66.38	0.00e+00	866.00
IUUC-Tru-118294	Takifugu rubripes	49.63	6.00e-137	481.00
IUUC-Tsy-119086	Tarsius syrichta	78.77	0.00e+00	1079.00
IUUC-Tni-120067	Tetraodon nigroviridis	49.43	4.00e-134	471.00
IUUC-Tre-122247	Trichoderma reesei	29.65	7.00e-41	161.00
IUUC-Tvi-122417	Trichoderma virens	30.52	2.00e-46	180.00
IUUC-Tbe-127278	Tupaia belangeri	74.05	0.00e+00	991.00
IUUC-Ttr-129147	Tursiops truncatus	76.53	0.00e+00	843.00
IUUC-Uma-129397	Ustilago maydis	38.79	4.00e-37	149.00
IUUC-Vda-129773	Verticillium dahliae	30.98	4.00e-42	166.00
IUUC-Vpa-130771	Vicugna pacos	75.04	0.00e+00	1024.00
IUUC-Xtr-132975	Xenopus tropicalis	55.35	2.00e-159	556.00
IUUC-Xma-133429	Xiphophorus maculatus	50.47	9.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence