iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129689

Ensembl Protein ID

EGY18499

UniProt Accession

G2XFA1; G2XFA1_VERDV

Genbank Protein ID

EGY18499.1

Protein Name

THO complex subunit 3

Genbank Nucleotide ID

DS572716

Gene Name

VDAG_08833

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_08833	EGY18499	EGY18499

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-16	57.4	220	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH++   + +  ++ ++l++G++D  i +WD++
   Q: 220  GHASQCLSAEMqPTaRYLATGGYDSIIALWDTT 252
           6777777778898999***************76 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MAPLSRPKTS LPRERFTTYL KDIKIQTYQD PSFGSSSRNS GSSRSIWSIS WNPTGSLIAT 60
GADRILRVWN PEKPVARFST ELKGHTAAIA KVAFNPAKDA ELCSISFDGV AKFWDVRSKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCTGTCAA GAAGAATCAC TTTATTCGGA GTGCTCAGTC TACCTTATGC TCGCCCTGAG 60
CTCCCGGACT GTGTAGTTGG TTGGAAGTGC CACGAACCAA CTTCTATGAG ACATAAGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

vda:VDAG_08833

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	27.49	3.00e-32	130.00
IUUC-Aml-001264	Ailuropoda melanoleuca	29.26	4.00e-37	146.00
IUUC-Atr-003050	Amborella trichopoda	29.97	2.00e-39	154.00
IUUC-Apl-003426	Anas platyrhynchos	26.94	2.00e-28	117.00
IUUC-Aca-004931	Anolis carolinensis	30.43	3.00e-31	126.00
IUUC-Aly-006237	Arabidopsis lyrata	31.54	1.00e-42	164.00
IUUC-Ath-007581	Arabidopsis thaliana	31.88	8.00e-43	165.00
IUUC-Acl-008253	Aspergillus clavatus	42.12	3.00e-75	273.00
IUUC-Afl-008519	Aspergillus flavus	44.41	4.00e-75	273.00
IUUC-Afu-008886	Aspergillus fumigatus	41.49	9.00e-73	265.00
IUUC-Ani-009275	Aspergillus nidulans	42.34	2.00e-74	270.00
IUUC-Ang-009862	Aspergillus niger	47.06	1.00e-71	260.00
IUUC-Aor-010164	Aspergillus oryzae	50.34	1.00e-36	143.00
IUUC-Ate-010247	Aspergillus terreus	42.66	6.00e-76	275.00
IUUC-Ame-010828	Astyanax mexicanus	28.89	6.00e-37	145.00
IUUC-Bgr-012163	Blumeria graminis	59.64	3.00e-93	332.00
IUUC-Bta-013514	Bos taurus	28.62	2.00e-30	124.00
IUUC-Bci-013639	Botrytis cinerea	60.59	2.00e-122	429.00
IUUC-Bdi-015049	Brachypodium distachyon	27.63	3.00e-31	127.00
IUUC-Bol-015401	Brassica oleracea	31.77	5.00e-39	152.00
IUUC-Bra-017867	Brassica rapa	31.77	4.00e-39	153.00
IUUC-Cel-018699	Caenorhabditis elegans	23.32	8.00e-18	82.40
IUUC-Cja-019591	Callithrix jacchus	29.26	3.00e-37	147.00
IUUC-Cfa-020692	Canis familiaris	29.26	4.00e-37	146.00
IUUC-Cpo-022135	Cavia porcellus	31.28	5.00e-30	123.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	29.82	1.00e-22	98.60
IUUC-Csa-023408	Chlorocebus sabaeus	29.26	4.00e-37	146.00
IUUC-Cho-024340	Choloepus hoffmanni	28.41	1.00e-24	104.00
IUUC-Cin-025418	Ciona intestinalis	30.00	1.00e-15	73.60
IUUC-Csv-026130	Ciona savignyi	27.61	1.00e-33	134.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	64.40	1.00e-123	434.00
IUUC-Cne-026775	Cryptococcus neoformans	28.04	2.00e-11	62.00
IUUC-Dre-028634	Danio rerio	28.89	9.00e-37	145.00
IUUC-Dno-029449	Dasypus novemcinctus	29.26	4.00e-37	146.00
IUUC-Dor-030301	Dipodomys ordii	30.54	7.00e-24	102.00
IUUC-Dse-031341	Dothistroma septosporum	34.88	2.00e-47	181.00
IUUC-Dme-031674	Drosophila melanogaster	29.27	7.00e-36	142.00
IUUC-Ete-033136	Echinops telfairi	28.89	2.00e-36	144.00
IUUC-Eca-034432	Equus caballus	29.88	4.00e-36	143.00
IUUC-Fca-035694	Felis catus	29.26	4.00e-37	146.00
IUUC-Fal-037328	Ficedula albicollis	28.89	6.00e-37	145.00
IUUC-Fox-037894	Fusarium oxysporum	61.47	5.00e-128	448.00
IUUC-Fso-038266	Fusarium solani	59.83	2.00e-126	443.00
IUUC-Gmo-039617	Gadus morhua	28.15	6.00e-36	142.00
IUUC-Ggr-039819	Gaeumannomyces graminis	57.18	5.00e-103	365.00
IUUC-Gga-040172	Gallus gallus	28.89	1.00e-36	145.00
IUUC-Gac-042407	Gasterosteus aculeatus	28.15	6.00e-37	145.00
IUUC-Gma-043663	Glycine max	30.85	1.00e-40	157.00
IUUC-Ggo-044989	Gorilla gorilla	29.26	4.00e-37	146.00
IUUC-Hsa-046784	Homo sapiens	29.26	3.00e-37	147.00
IUUC-Hvu-047633	Hordeum vulgare	27.65	4.00e-24	102.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	23.27	1.00e-15	75.50
IUUC-Lch-049894	Latimeria chalumnae	29.26	2.00e-37	147.00
IUUC-Lpe-051061	Leersia perrieri	24.92	6.00e-21	92.80
IUUC-Loc-052424	Lepisosteus oculatus	28.89	2.00e-37	147.00
IUUC-Lma-053127	Leptosphaeria maculans	41.62	2.00e-66	245.00
IUUC-Laf-053396	Loxodonta africana	29.63	1.00e-37	148.00
IUUC-Mcc-055517	Macaca mulatta	29.26	4.00e-37	146.00
IUUC-Meu-056034	Macropus eugenii	29.63	9.00e-38	149.00
IUUC-Mor-057011	Magnaporthe oryzae	49.45	1.00e-70	258.00
IUUC-Mpo-057490	Magnaporthe poae	56.94	3.00e-103	366.00
IUUC-Mtr-057927	Medicago truncatula	30.30	8.00e-39	152.00
IUUC-Mla-058945	Melampsora laricipopulina	27.91	4.00e-29	119.00
IUUC-Mga-060155	Meleagris gallopavo	27.80	3.00e-32	130.00
IUUC-Mvi-060344	Microbotryum violaceum	27.99	8.00e-30	122.00
IUUC-Mmr-060834	Microcebus murinus	29.63	1.00e-37	148.00
IUUC-Mdo-062587	Monodelphis domestica	29.63	5.00e-38	149.00
IUUC-Mmu-063395	Mus musculus	29.26	3.00e-37	147.00
IUUC-Mac-064579	Musa acuminata	31.31	3.00e-41	160.00
IUUC-Mpu-066688	Mustela putorius furo	28.28	4.00e-31	126.00
IUUC-Mlu-067299	Myotis lucifugus	29.63	1.00e-37	148.00
IUUC-Nfi-068562	Neosartorya fischeri	42.93	5.00e-75	272.00
IUUC-Ncr-068654	Neurospora crassa	60.64	1.00e-109	387.00
IUUC-Nle-069736	Nomascus leucogenys	29.26	2.00e-37	147.00
IUUC-Ont-071763	Oreochromis niloticus	28.89	1.00e-37	148.00
IUUC-Ocu-074909	Oryctolagus cuniculus	29.26	3.00e-37	147.00
IUUC-Oba-075902	Oryza barthii	24.92	7.00e-22	95.90
IUUC-Obr-076613	Oryza brachyantha	28.96	3.00e-33	134.00
IUUC-Ogl-077009	Oryza glaberrima	28.62	1.00e-32	131.00
IUUC-Ogu-078344	Oryza glumaepatula	24.92	7.00e-22	95.90
IUUC-Oin-079773	Oryza indica	28.62	1.00e-32	131.00
IUUC-Olo-080474	Oryza longistaminata	27.27	6.00e-17	79.00
IUUC-Oni-082263	Oryza nivara	24.92	7.00e-22	95.90
IUUC-Opu-083813	Oryza punctata	28.62	2.00e-32	131.00
IUUC-Oru-084610	Oryza rufipogon	24.92	7.00e-22	95.90
IUUC-Osa-085415	Oryza sativa	28.62	2.00e-32	131.00
IUUC-Ola-086659	Oryzias latipes	28.89	3.00e-37	147.00
IUUC-Olu-087649	Ostreococcus lucimarinus	26.38	5.00e-28	116.00
IUUC-Oga-087923	Otolemur garnettii	29.26	3.00e-37	147.00
IUUC-Oar-089688	Ovis aries	29.26	9.00e-38	149.00
IUUC-Ptr-091628	Pan troglodytes	29.26	3.00e-37	147.00
IUUC-Pan-092586	Papio anubis	30.04	1.00e-36	144.00
IUUC-Psi-093701	Pelodiscus sinensis	30.41	3.00e-29	119.00
IUUC-Pma-094465	Petromyzon marinus	28.52	8.00e-37	145.00
IUUC-Pno-094767	Phaeosphaeria nodorum	44.06	5.00e-64	237.00
IUUC-Ppa-095195	Physcomitrella patens	30.41	4.00e-39	153.00
IUUC-Pfo-097383	Poecilia formosa	29.26	5.00e-38	149.00
IUUC-Pab-098669	Pongo abelii	29.26	3.00e-37	147.00
IUUC-Pop-099409	Populus trichocarpa	29.97	1.00e-38	151.00
IUUC-Pca-100769	Procavia capensis	24.81	1.00e-25	108.00
IUUC-Ppe-101321	Prunus persica	30.85	3.00e-39	153.00
IUUC-Pva-102759	Pteropus vampyrus	28.89	2.00e-36	144.00
IUUC-Pgr-103535	Puccinia graminis	31.48	2.00e-33	134.00
IUUC-Ptt-103820	Puccinia triticina	31.03	3.00e-33	133.00
IUUC-Pte-104271	Pyrenophora teres	39.77	2.00e-60	224.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	40.00	8.00e-53	199.00
IUUC-Rno-106126	Rattus norvegicus	29.26	4.00e-37	146.00
IUUC-Sha-107146	Sarcophilus harrisii	29.63	1.00e-37	148.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	29.20	5.00e-38	149.00
IUUC-Spo-108324	Schizosaccharomyces pombe	29.55	7.00e-35	139.00
IUUC-Smo-108990	Selaginella moellendorffii	30.72	4.00e-39	153.00
IUUC-Sit-110773	Setaria italica	27.76	2.00e-32	131.00
IUUC-Sly-111619	Solanum lycopersicum	29.63	2.00e-39	154.00
IUUC-Stu-112241	Solanum tuberosum	29.97	5.00e-40	156.00
IUUC-Sbi-114842	Sorghum bicolor	28.76	2.00e-32	130.00
IUUC-Sre-115070	Sporisorium reilianum	27.48	1.00e-23	102.00
IUUC-Ssc-115581	Sus scrofa	29.26	3.00e-37	147.00
IUUC-Tgu-117354	Taeniopygia guttata	27.78	6.00e-34	135.00
IUUC-Tru-117745	Takifugu rubripes	28.15	7.00e-36	142.00
IUUC-Tni-120050	Tetraodon nigroviridis	29.15	5.00e-36	142.00
IUUC-Tca-121279	Theobroma cacao	30.98	1.00e-40	158.00
IUUC-Tre-121952	Trichoderma reesei	62.06	2.00e-126	443.00
IUUC-Tvi-122581	Trichoderma virens	61.18	2.00e-126	443.00
IUUC-Tae-123910	Triticum aestivum	28.36	4.00e-32	129.00
IUUC-Tur-126279	Triticum urartu	27.43	2.00e-30	124.00
IUUC-Tme-127000	Tuber melanosporum	35.12	2.00e-42	164.00
IUUC-Ttr-128405	Tursiops truncatus	29.88	1.00e-36	144.00
IUUC-Uma-129547	Ustilago maydis	26.90	4.00e-24	103.00
IUUC-Vvi-131345	Vitis vinifera	31.31	1.00e-40	157.00
IUUC-Xtr-132136	Xenopus tropicalis	29.89	4.00e-39	153.00
IUUC-Xma-133767	Xiphophorus maculatus	29.26	4.00e-38	149.00
IUUC-Yli-134522	Yarrowia lipolytica	38.05	2.00e-17	81.60
IUUC-Zma-135816	Zea mays	28.43	5.00e-32	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence