iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064535

Ensembl Protein ID

GSMUA_Achr6P31120_001

UniProt Accession

M0TBQ7; M0TBQ7_MUSAM

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr6G31120_001	GSMUA_Achr6T31120_001	GSMUA_Achr6P31120_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-11	43.9	405	443

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt++v  ++   s+  ++sGs Dgt++vW++ t ++l+
   Q: 405  GHTGPVKTISIdvSGQWMASGSSDGTVRVWEIETSRCLR 443
           8**********9877889****************99986 PP

Organism

Musa acuminata

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MILKPCFSSY ALTRARSRRE RESCSGYRRT SMVAAAAAAT AMGKSQRSSK NSDRLEQEIA 60
ENPAANEDVE EASGGDEESQ PSDAASLSED EGSQGSPVDS EEENGDVSDD EDHRSGEESD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCTTAA AACCCTGCTT CTCCTCTTAT GCCCTAACCA GAGCTCGATC GAGGAGAGAG 60
AGAGAGAGTT GCAGCGGCTA CAGGAGGACC TCCATGGTTG CGGCGGCGGC AGCAGCAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	72.52	1.00e-168	586.00
IUUC-Aml-001507	Ailuropoda melanoleuca	42.69	3.00e-96	345.00
IUUC-Atr-003141	Amborella trichopoda	70.07	3.00e-175	607.00
IUUC-Apl-003545	Anas platyrhynchos	38.60	4.00e-79	288.00
IUUC-Aly-005649	Arabidopsis lyrata	62.55	6.00e-179	620.00
IUUC-Ath-007625	Arabidopsis thaliana	60.74	2.00e-170	592.00
IUUC-Ago-007958	Ashbya gossypii	38.43	2.00e-82	299.00
IUUC-Acl-008344	Aspergillus clavatus	39.11	9.00e-73	267.00
IUUC-Afl-008616	Aspergillus flavus	39.10	3.00e-75	276.00
IUUC-Afu-009083	Aspergillus fumigatus	39.60	6.00e-69	254.00
IUUC-Ani-009365	Aspergillus nidulans	38.72	3.00e-74	272.00
IUUC-Ang-009796	Aspergillus niger	40.05	4.00e-72	265.00
IUUC-Aor-010015	Aspergillus oryzae	39.10	3.00e-75	276.00
IUUC-Ate-010537	Aspergillus terreus	39.37	1.00e-78	286.00
IUUC-Ame-011767	Astyanax mexicanus	54.04	3.00e-58	217.00
IUUC-Bgr-012286	Blumeria graminis	39.68	8.00e-79	287.00
IUUC-Bta-013569	Bos taurus	43.16	3.00e-93	335.00
IUUC-Bci-013820	Botrytis cinerea	37.50	1.00e-68	253.00
IUUC-Bdi-014477	Brachypodium distachyon	74.29	0.00e+00	642.00
IUUC-Bol-016099	Brassica oleracea	68.75	0.00e+00	630.00
IUUC-Bra-017174	Brassica rapa	68.99	0.00e+00	639.00
IUUC-Cel-018201	Caenorhabditis elegans	41.69	3.00e-82	298.00
IUUC-Cja-019009	Callithrix jacchus	40.98	6.00e-89	321.00
IUUC-Cfa-020173	Canis familiaris	35.70	3.00e-80	292.00
IUUC-Cpo-021796	Cavia porcellus	41.51	8.00e-90	324.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	45.48	1.00e-105	376.00
IUUC-Csa-023440	Chlorocebus sabaeus	41.82	4.00e-95	342.00
IUUC-Cin-025782	Ciona intestinalis	39.29	5.00e-93	335.00
IUUC-Csv-026352	Ciona savignyi	45.01	2.00e-90	326.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.44	4.00e-63	235.00
IUUC-Cne-027004	Cryptococcus neoformans	40.05	8.00e-85	307.00
IUUC-Cme-027242	Cyanidioschyzon merolae	48.11	6.00e-50	191.00
IUUC-Dre-028658	Danio rerio	41.96	9.00e-96	344.00
IUUC-Dno-028883	Dasypus novemcinctus	42.15	2.00e-93	336.00
IUUC-Dor-031031	Dipodomys ordii	38.19	3.00e-93	335.00
IUUC-Dse-031443	Dothistroma septosporum	36.52	2.00e-69	256.00
IUUC-Dme-031786	Drosophila melanogaster	35.31	2.00e-87	316.00
IUUC-Eca-033677	Equus caballus	42.29	1.00e-93	336.00
IUUC-Eeu-035310	Erinaceus europaeus	43.16	5.00e-99	354.00
IUUC-Fca-035888	Felis catus	41.26	5.00e-89	321.00
IUUC-Fal-037438	Ficedula albicollis	42.32	6.00e-66	244.00
IUUC-Fox-037973	Fusarium oxysporum	34.89	2.00e-73	269.00
IUUC-Fso-038187	Fusarium solani	35.28	7.00e-73	268.00
IUUC-Gmo-039114	Gadus morhua	38.92	2.00e-77	282.00
IUUC-Ggr-039746	Gaeumannomyces graminis	36.22	3.00e-83	302.00
IUUC-Gga-040631	Gallus gallus	56.22	2.00e-56	212.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.33	2.00e-86	312.00
IUUC-Gma-044307	Glycine max	63.47	5.00e-178	617.00
IUUC-Ggo-045587	Gorilla gorilla	41.82	3.00e-95	342.00
IUUC-Hsa-046319	Homo sapiens	41.82	3.00e-95	342.00
IUUC-Hvu-047526	Hordeum vulgare	73.10	0.00e+00	631.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	41.84	7.00e-93	334.00
IUUC-Kpa-049221	Komagataella pastoris	36.32	1.00e-72	267.00
IUUC-Lch-049640	Latimeria chalumnae	43.66	4.00e-97	348.00
IUUC-Lpe-051135	Leersia perrieri	72.73	4.00e-168	583.00
IUUC-Loc-051930	Lepisosteus oculatus	43.79	2.00e-100	359.00
IUUC-Lma-053290	Leptosphaeria maculans	38.15	2.00e-68	253.00
IUUC-Laf-053903	Loxodonta africana	40.75	2.00e-84	306.00
IUUC-Mcc-055471	Macaca mulatta	41.59	4.00e-95	342.00
IUUC-Meu-056190	Macropus eugenii	42.52	3.00e-92	332.00
IUUC-Mor-057135	Magnaporthe oryzae	36.71	2.00e-74	273.00
IUUC-Mpo-057475	Magnaporthe poae	37.22	4.00e-76	278.00
IUUC-Mtr-058689	Medicago truncatula	68.81	8.00e-163	566.00
IUUC-Mla-059149	Melampsora laricipopulina	40.65	2.00e-84	306.00
IUUC-Mga-059645	Meleagris gallopavo	49.56	3.00e-25	107.00
IUUC-Mvi-060485	Microbotryum violaceum	40.18	2.00e-70	261.00
IUUC-Mmr-061674	Microcebus murinus	41.04	3.00e-85	308.00
IUUC-Mdo-062973	Monodelphis domestica	40.43	4.00e-97	348.00
IUUC-Mmu-064180	Mus musculus	40.37	1.00e-94	340.00
IUUC-Mpu-066406	Mustela putorius furo	42.52	3.00e-98	352.00
IUUC-Mlu-067795	Myotis lucifugus	42.92	9.00e-87	313.00
IUUC-Nfi-068516	Neosartorya fischeri	39.82	6.00e-63	234.00
IUUC-Ncr-068767	Neurospora crassa	37.30	8.00e-67	248.00
IUUC-Opr-071084	Ochotona princeps	41.73	5.00e-58	217.00
IUUC-Ont-071614	Oreochromis niloticus	40.89	4.00e-94	338.00
IUUC-Oba-075980	Oryza barthii	71.97	5.00e-165	573.00
IUUC-Obr-076799	Oryza brachyantha	72.62	0.00e+00	637.00
IUUC-Ogl-077134	Oryza glaberrima	73.33	4.00e-179	620.00
IUUC-Ogu-078655	Oryza glumaepatula	72.86	4.00e-178	617.00
IUUC-Oin-079654	Oryza indica	73.33	4.00e-179	620.00
IUUC-Olo-080706	Oryza longistaminata	72.73	4.00e-167	580.00
IUUC-Ome-081716	Oryza meridionalis	71.57	1.00e-166	579.00
IUUC-Oni-082508	Oryza nivara	73.27	1.00e-178	619.00
IUUC-Opu-083707	Oryza punctata	72.47	2.00e-166	578.00
IUUC-Oru-084453	Oryza rufipogon	72.73	4.00e-167	580.00
IUUC-Osa-085811	Oryza sativa	73.10	6.00e-179	620.00
IUUC-Ola-087361	Oryzias latipes	41.81	4.00e-96	345.00
IUUC-Oga-088015	Otolemur garnettii	40.09	1.00e-90	327.00
IUUC-Oar-090058	Ovis aries	50.30	8.00e-42	164.00
IUUC-Ptr-090631	Pan troglodytes	40.38	9.00e-58	216.00
IUUC-Pan-092306	Papio anubis	41.82	3.00e-95	342.00
IUUC-Pma-094622	Petromyzon marinus	43.33	1.00e-95	343.00
IUUC-Pno-094794	Phaeosphaeria nodorum	34.24	2.00e-60	226.00
IUUC-Ppa-095528	Physcomitrella patens	57.78	1.00e-152	532.00
IUUC-Pfo-096682	Poecilia formosa	41.45	3.00e-97	348.00
IUUC-Pab-097939	Pongo abelii	40.64	5.00e-79	288.00
IUUC-Pop-099043	Populus trichocarpa	73.39	4.00e-160	557.00
IUUC-Pca-100333	Procavia capensis	41.51	7.00e-92	331.00
IUUC-Ppe-102078	Prunus persica	68.79	2.00e-171	595.00
IUUC-Pgr-103525	Puccinia graminis	39.72	1.00e-74	274.00
IUUC-Ptt-103929	Puccinia triticina	40.18	2.00e-74	273.00
IUUC-Pte-104029	Pyrenophora teres	38.46	2.00e-81	296.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	38.69	4.00e-81	295.00
IUUC-Rno-105248	Rattus norvegicus	42.72	2.00e-94	339.00
IUUC-Sce-106381	Saccharomyces cerevisiae	37.42	2.00e-78	286.00
IUUC-Sha-106519	Sarcophilus harrisii	43.79	3.00e-99	355.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	37.21	3.00e-72	266.00
IUUC-Spo-108071	Schizosaccharomyces pombe	36.22	3.00e-69	256.00
IUUC-Smo-109604	Selaginella moellendorffii	64.68	1.00e-154	540.00
IUUC-Sit-110551	Setaria italica	73.57	0.00e+00	643.00
IUUC-Sly-110970	Solanum lycopersicum	80.24	9.00e-162	562.00
IUUC-Stu-112593	Solanum tuberosum	76.01	0.00e+00	659.00
IUUC-Sar-113123	Sorex araneus	50.27	7.00e-48	183.00
IUUC-Sbi-113945	Sorghum bicolor	73.10	0.00e+00	644.00
IUUC-Sre-115188	Sporisorium reilianum	36.27	5.00e-75	275.00
IUUC-Ssc-115352	Sus scrofa	41.27	2.00e-93	335.00
IUUC-Tru-117685	Takifugu rubripes	43.22	1.00e-95	343.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.42	1.00e-89	323.00
IUUC-Tca-121664	Theobroma cacao	68.08	0.00e+00	658.00
IUUC-Tre-122229	Trichoderma reesei	37.42	2.00e-61	230.00
IUUC-Tvi-122576	Trichoderma virens	36.77	1.00e-63	237.00
IUUC-Tae-124110	Triticum aestivum	73.75	1.00e-173	602.00
IUUC-Tur-126781	Triticum urartu	72.52	3.00e-164	571.00
IUUC-Tme-127080	Tuber melanosporum	42.36	1.00e-93	337.00
IUUC-Ttr-128514	Tursiops truncatus	42.22	2.00e-92	333.00
IUUC-Uma-129556	Ustilago maydis	37.12	9.00e-73	268.00
IUUC-Vda-129715	Verticillium dahliae	35.62	8.00e-75	274.00
IUUC-Vvi-131211	Vitis vinifera	69.51	0.00e+00	689.00
IUUC-Xma-133883	Xiphophorus maculatus	43.22	5.00e-92	331.00
IUUC-Yli-134438	Yarrowia lipolytica	37.28	3.00e-69	256.00
IUUC-Zma-135341	Zea mays	72.45	0.00e+00	638.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence