iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133883

Ensembl Protein ID

ENSXMAP00000017705.1

UniProt Accession

M4ATB0; M4ATB0_XIPMA

Genbank Protein ID

ENSXMAP00000017705

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AGAJ01019129

Gene Name

bop1; BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000017647.1	ENSXMAT00000017730.1	ENSXMAP00000017705.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-13	49.3	431	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ v++++  ++   lvsGsdDg++++W++ + ++lk+
   Q: 431  GHSGLVRSISVsPSgQWLVSGSDDGSVRLWEVCSSRCLKT 470
           8**********966699*****************999985 PP

Organism

Xiphophorus maculatus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

ASRGNVQKAE QRTGMKKTEK TNKKRSKQDD EEEEEDQLFN LNNKSLEEDD DLSDSEESVY 60
SGLQDSGSDS DEEEEKGGSD DEDEQDQIIL LTIILLENSQ KTGWQRLTCS AHLMICCDTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAGCAGAG GAAACGTGCA GAAAGCCGAA CAGAGAACCG GCATGAAGAA AACAGAGAAA 60
ACGAACAAAA AGAGGAGTAA ACAGGACGAT GAAGAAGAGG AGGAAGATCA GGTGAGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.48	2.00e-123	436.00
IUUC-Aml-001507	Ailuropoda melanoleuca	67.04	0.00e+00	842.00
IUUC-Atr-003141	Amborella trichopoda	42.29	2.00e-88	319.00
IUUC-Apl-003545	Anas platyrhynchos	64.59	0.00e+00	764.00
IUUC-Aly-005649	Arabidopsis lyrata	46.84	2.00e-159	556.00
IUUC-Ath-007625	Arabidopsis thaliana	47.09	2.00e-157	549.00
IUUC-Ago-007958	Ashbya gossypii	42.75	4.00e-164	571.00
IUUC-Acl-008344	Aspergillus clavatus	43.16	6.00e-144	504.00
IUUC-Afl-008616	Aspergillus flavus	42.16	5.00e-146	511.00
IUUC-Afu-009083	Aspergillus fumigatus	42.90	3.00e-140	492.00
IUUC-Ani-009365	Aspergillus nidulans	42.27	2.00e-146	513.00
IUUC-Ang-009796	Aspergillus niger	41.86	2.00e-141	496.00
IUUC-Aor-010015	Aspergillus oryzae	42.16	6.00e-146	511.00
IUUC-Ate-010537	Aspergillus terreus	42.81	3.00e-149	522.00
IUUC-Ame-011767	Astyanax mexicanus	73.88	1.00e-121	428.00
IUUC-Bgr-012286	Blumeria graminis	44.10	4.00e-155	541.00
IUUC-Bta-013569	Bos taurus	69.26	0.00e+00	879.00
IUUC-Bci-013820	Botrytis cinerea	42.70	5.00e-146	511.00
IUUC-Bdi-014895	Brachypodium distachyon	46.13	3.00e-157	548.00
IUUC-Bol-016099	Brassica oleracea	46.05	1.00e-156	546.00
IUUC-Bra-017174	Brassica rapa	45.73	1.00e-156	548.00
IUUC-Cel-018201	Caenorhabditis elegans	47.60	7.00e-160	557.00
IUUC-Cja-019009	Callithrix jacchus	61.19	0.00e+00	778.00
IUUC-Cfa-020173	Canis familiaris	64.07	0.00e+00	825.00
IUUC-Cpo-021796	Cavia porcellus	69.47	0.00e+00	873.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.70	3.00e-159	555.00
IUUC-Csa-023440	Chlorocebus sabaeus	70.16	0.00e+00	914.00
IUUC-Cin-025782	Ciona intestinalis	57.21	0.00e+00	778.00
IUUC-Csv-026352	Ciona savignyi	57.25	0.00e+00	759.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.62	8.00e-121	427.00
IUUC-Cne-027004	Cryptococcus neoformans	45.84	2.00e-172	599.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.55	2.00e-115	409.00
IUUC-Dre-028658	Danio rerio	77.27	0.00e+00	1018.00
IUUC-Dno-028883	Dasypus novemcinctus	68.36	0.00e+00	883.00
IUUC-Dor-031031	Dipodomys ordii	68.20	0.00e+00	902.00
IUUC-Dse-031443	Dothistroma septosporum	40.12	3.00e-144	505.00
IUUC-Dme-031786	Drosophila melanogaster	53.45	0.00e+00	718.00
IUUC-Eca-033677	Equus caballus	64.88	0.00e+00	896.00
IUUC-Eeu-035310	Erinaceus europaeus	66.27	0.00e+00	713.00
IUUC-Fca-035888	Felis catus	66.61	0.00e+00	871.00
IUUC-Fal-037438	Ficedula albicollis	63.59	0.00e+00	697.00
IUUC-Fox-037973	Fusarium oxysporum	42.41	7.00e-158	551.00
IUUC-Fso-038187	Fusarium solani	42.72	2.00e-158	552.00
IUUC-Gmo-039114	Gadus morhua	72.30	0.00e+00	918.00
IUUC-Ggr-039746	Gaeumannomyces graminis	43.28	2.00e-162	566.00
IUUC-Gga-040631	Gallus gallus	67.93	2.00e-144	505.00
IUUC-Gac-042582	Gasterosteus aculeatus	84.71	0.00e+00	1090.00
IUUC-Gma-044215	Glycine max	45.22	3.00e-147	515.00
IUUC-Ggo-045587	Gorilla gorilla	70.58	0.00e+00	919.00
IUUC-Hsa-046319	Homo sapiens	70.65	0.00e+00	917.00
IUUC-Hvu-047526	Hordeum vulgare	44.82	4.00e-147	514.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	69.63	0.00e+00	893.00
IUUC-Kpa-049221	Komagataella pastoris	41.99	2.00e-157	549.00
IUUC-Lch-049640	Latimeria chalumnae	73.93	0.00e+00	988.00
IUUC-Lpe-051135	Leersia perrieri	41.45	7.00e-132	464.00
IUUC-Loc-051930	Lepisosteus oculatus	75.28	0.00e+00	989.00
IUUC-Lma-053290	Leptosphaeria maculans	43.26	3.00e-145	509.00
IUUC-Laf-053903	Loxodonta africana	63.11	0.00e+00	775.00
IUUC-Mcc-055471	Macaca mulatta	69.84	0.00e+00	912.00
IUUC-Meu-056190	Macropus eugenii	68.71	0.00e+00	877.00
IUUC-Mor-057135	Magnaporthe oryzae	41.77	3.00e-149	522.00
IUUC-Mpo-057475	Magnaporthe poae	42.35	2.00e-150	526.00
IUUC-Mtr-058689	Medicago truncatula	42.18	9.00e-133	467.00
IUUC-Mla-059149	Melampsora laricipopulina	45.20	2.00e-167	582.00
IUUC-Mga-059645	Meleagris gallopavo	60.08	3.00e-88	317.00
IUUC-Mvi-060485	Microbotryum violaceum	44.94	3.00e-151	530.00
IUUC-Mmr-061674	Microcebus murinus	69.08	0.00e+00	886.00
IUUC-Mdo-062973	Monodelphis domestica	69.95	0.00e+00	918.00
IUUC-Mmu-064180	Mus musculus	63.76	0.00e+00	888.00
IUUC-Mac-064535	Musa acuminata	43.22	1.00e-98	354.00
IUUC-Mpu-066406	Mustela putorius furo	68.98	0.00e+00	897.00
IUUC-Mlu-067795	Myotis lucifugus	69.47	0.00e+00	859.00
IUUC-Nfi-068516	Neosartorya fischeri	42.86	3.00e-133	469.00
IUUC-Ncr-068767	Neurospora crassa	44.03	1.00e-143	504.00
IUUC-Opr-071084	Ochotona princeps	65.25	1.00e-110	393.00
IUUC-Ont-071614	Oreochromis niloticus	88.51	0.00e+00	1173.00
IUUC-Oba-075980	Oryza barthii	41.77	1.00e-133	470.00
IUUC-Obr-076799	Oryza brachyantha	44.68	1.00e-147	516.00
IUUC-Ogl-077134	Oryza glaberrima	44.35	7.00e-143	501.00
IUUC-Ogu-078655	Oryza glumaepatula	42.90	1.00e-138	486.00
IUUC-Oin-079654	Oryza indica	44.35	1.00e-142	499.00
IUUC-Olo-080706	Oryza longistaminata	41.61	9.00e-133	467.00
IUUC-Ome-081716	Oryza meridionalis	31.64	1.00e-79	291.00
IUUC-Oni-082508	Oryza nivara	42.10	4.00e-134	471.00
IUUC-Opu-083707	Oryza punctata	42.63	2.00e-132	466.00
IUUC-Oru-084453	Oryza rufipogon	41.61	9.00e-133	467.00
IUUC-Osa-085811	Oryza sativa	44.35	6.00e-143	501.00
IUUC-Ola-087361	Oryzias latipes	88.84	0.00e+00	1179.00
IUUC-Oga-088015	Otolemur garnettii	68.98	0.00e+00	904.00
IUUC-Oar-090058	Ovis aries	73.05	6.00e-72	265.00
IUUC-Ptr-090631	Pan troglodytes	63.84	2.00e-115	409.00
IUUC-Pan-092306	Papio anubis	70.21	0.00e+00	913.00
IUUC-Pma-094622	Petromyzon marinus	68.65	0.00e+00	932.00
IUUC-Pno-094794	Phaeosphaeria nodorum	39.81	6.00e-135	474.00
IUUC-Ppa-095528	Physcomitrella patens	44.34	1.00e-99	357.00
IUUC-Pfo-096682	Poecilia formosa	97.93	0.00e+00	1284.00
IUUC-Pab-097939	Pongo abelii	69.72	0.00e+00	811.00
IUUC-Pop-099530	Populus trichocarpa	48.07	5.00e-144	504.00
IUUC-Pca-100333	Procavia capensis	68.17	0.00e+00	880.00
IUUC-Ppe-102078	Prunus persica	44.75	1.00e-148	520.00
IUUC-Pgr-103525	Puccinia graminis	44.95	3.00e-155	542.00
IUUC-Ptt-103929	Puccinia triticina	44.65	2.00e-152	533.00
IUUC-Pte-104029	Pyrenophora teres	42.64	1.00e-155	543.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.79	6.00e-156	544.00
IUUC-Rno-105248	Rattus norvegicus	69.14	0.00e+00	883.00
IUUC-Sce-106381	Saccharomyces cerevisiae	40.57	6.00e-156	544.00
IUUC-Sha-106519	Sarcophilus harrisii	68.86	0.00e+00	902.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	42.05	5.00e-140	491.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.08	2.00e-141	496.00
IUUC-Smo-109604	Selaginella moellendorffii	47.65	3.00e-158	552.00
IUUC-Sit-110551	Setaria italica	44.84	1.00e-147	516.00
IUUC-Sly-110970	Solanum lycopersicum	44.77	7.00e-80	291.00
IUUC-Stu-112593	Solanum tuberosum	44.81	1.00e-153	536.00
IUUC-Sar-113123	Sorex araneus	64.38	3.00e-109	388.00
IUUC-Sbi-113945	Sorghum bicolor	44.52	2.00e-150	526.00
IUUC-Sre-115188	Sporisorium reilianum	42.50	1.00e-154	540.00
IUUC-Ssc-115352	Sus scrofa	68.39	0.00e+00	884.00
IUUC-Tru-117685	Takifugu rubripes	86.88	0.00e+00	1170.00
IUUC-Tni-119982	Tetraodon nigroviridis	84.14	0.00e+00	1102.00
IUUC-Tca-121664	Theobroma cacao	45.69	2.00e-157	549.00
IUUC-Tre-122229	Trichoderma reesei	41.72	9.00e-140	490.00
IUUC-Tvi-122576	Trichoderma virens	42.41	1.00e-144	506.00
IUUC-Tae-125703	Triticum aestivum	44.61	3.00e-144	505.00
IUUC-Tur-126781	Triticum urartu	41.48	3.00e-119	422.00
IUUC-Tme-127080	Tuber melanosporum	46.77	4.00e-178	617.00
IUUC-Ttr-128514	Tursiops truncatus	67.57	6.00e-177	614.00
IUUC-Uma-129556	Ustilago maydis	41.96	5.00e-150	525.00
IUUC-Vda-129715	Verticillium dahliae	42.41	9.00e-152	530.00
IUUC-Vvi-131211	Vitis vinifera	45.21	8.00e-147	514.00
IUUC-Yli-134438	Yarrowia lipolytica	43.31	8.00e-147	514.00
IUUC-Zma-135341	Zea mays	40.56	1.00e-136	480.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence