iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017216

Ensembl Protein ID

Bra035751.1-P

UniProt Accession

M4F3V1; M4F3V1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035751	Bra035751.1	Bra035751.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-17	62.2	171	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH  +v +++f  +d +++vs++ D tik+W++
   Q: 171  GHRYEVVSVDFhpHDeHRFVSCGMDTTIKIWSM 203
           8999********977799*************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKIALGNES LVGSLTPSNK KSYKLTNRIQ EGKIPLYSVV FNSIDARFFN CFVSAGGNGI 60
NLYNCLEDGG ISSLHSYTDE DEESFYTVSW ACGVEGNPFV AAGGVKGIIR VLNVNDKIIH 120

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Nucleotide Sequence
(Fasta)

ATGTCGAAGA TAGCTTTAGG GAACGAATCA CTTGTCGGGT CTTTGACTCC ATCCAACAAA 60
AAATCTTACA AACTGACCAA CAGGATTCAA GAAGGGAAGA TACCTTTGTA CTCTGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015287	Brassica oleracea	97.04	0.00e+00	748.00
IUUC-Lma-053058	Leptosphaeria maculans	25.71	5.00e-15	75.50
IUUC-Pno-095072	Phaeosphaeria nodorum	25.56	5.00e-13	68.60
IUUC-Pte-104406	Pyrenophora teres	28.39	1.00e-24	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence