iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098930

Ensembl Protein ID

POPTR_0001s44290.1

UniProt Accession

U5GWG5; U5GWG5_POPTR

Genbank Protein ID

ERP67186.1

Protein Name

FERTILIZATION-INDEPENDENT ENDOSPERM family protein

Genbank Nucleotide ID

CM000337

Gene Name

FIE; POPTR_0001s44290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s44290	POPTR_0001s44290.1	POPTR_0001s44290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-20	73.9	172	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH ++v +++f  sd  +++s++ D+t+k+W++
   Q: 172  GHRNEVLSVDFhpSDiYRIASCGMDNTVKIWSM 204
           8***********999****************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAKIALGCEP VVGSLTPSKK REYRLTNRLQ EGKRPLYAVV FNFIDSRYFN VFATVGGNRV 60
TVYQCLDEGV IAVLQSYVDE DKDESFYTVS WACNIDGAPF VVAGGINGIM RVINASNEEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACATGTCA TTCATACACA TTACCCTTCT GCCCAGCTTC CTGAACATCA CAAGCCTGAT 60
TAGTGATTAA TCAAATCTCC CAGTTCCTGA ACTGGAAGCC AAAAAAAACC CTCAAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

KEGG

pop:POPTR_0001s44290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	76.86	8.00e-176	609.00
IUUC-Aml-001510	Ailuropoda melanoleuca	41.32	6.00e-74	271.00
IUUC-Atr-002496	Amborella trichopoda	84.34	7.00e-175	605.00
IUUC-Apl-003768	Anas platyrhynchos	41.83	4.00e-77	281.00
IUUC-Aca-004382	Anolis carolinensis	41.83	2.00e-77	282.00
IUUC-Aly-005980	Arabidopsis lyrata	76.57	2.00e-178	617.00
IUUC-Ath-006579	Arabidopsis thaliana	76.02	8.00e-179	619.00
IUUC-Ame-010987	Astyanax mexicanus	42.06	2.00e-76	278.00
IUUC-Bta-013432	Bos taurus	41.83	1.00e-77	283.00
IUUC-Bci-013970	Botrytis cinerea	29.60	4.00e-23	102.00
IUUC-Bdi-014553	Brachypodium distachyon	78.80	4.00e-180	623.00
IUUC-Bol-016522	Brassica oleracea	76.57	1.00e-178	618.00
IUUC-Bra-017137	Brassica rapa	76.57	4.00e-179	619.00
IUUC-Cel-018494	Caenorhabditis elegans	26.17	3.00e-22	99.00
IUUC-Cja-019066	Callithrix jacchus	41.83	1.00e-77	283.00
IUUC-Cfa-021261	Canis familiaris	41.83	1.00e-77	283.00
IUUC-Cpo-022375	Cavia porcellus	37.67	3.00e-64	238.00
IUUC-Csa-024005	Chlorocebus sabaeus	41.83	1.00e-77	283.00
IUUC-Cho-024881	Choloepus hoffmanni	42.50	5.00e-51	194.00
IUUC-Cin-025697	Ciona intestinalis	38.67	5.00e-75	274.00
IUUC-Csv-026221	Ciona savignyi	37.91	4.00e-75	274.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	23.97	1.00e-16	80.10
IUUC-Cne-026877	Cryptococcus neoformans	27.35	3.00e-19	89.70
IUUC-Cme-027353	Cyanidioschyzon merolae	40.85	1.00e-26	114.00
IUUC-Dre-028346	Danio rerio	41.83	8.00e-77	280.00
IUUC-Dno-029319	Dasypus novemcinctus	41.55	2.00e-77	282.00
IUUC-Dor-030746	Dipodomys ordii	32.31	5.00e-49	188.00
IUUC-Dse-031324	Dothistroma septosporum	27.88	1.00e-19	90.50
IUUC-Dme-031874	Drosophila melanogaster	40.12	1.00e-72	266.00
IUUC-Ete-032880	Echinops telfairi	38.49	3.00e-40	158.00
IUUC-Eca-034272	Equus caballus	41.83	1.00e-77	283.00
IUUC-Eeu-035303	Erinaceus europaeus	38.12	3.00e-71	261.00
IUUC-Fca-036008	Felis catus	41.83	1.00e-77	283.00
IUUC-Fal-037577	Ficedula albicollis	41.83	5.00e-77	280.00
IUUC-Fso-038294	Fusarium solani	26.77	8.00e-25	107.00
IUUC-Gmo-039008	Gadus morhua	40.41	1.00e-68	253.00
IUUC-Ggr-039894	Gaeumannomyces graminis	27.69	4.00e-17	82.00
IUUC-Gga-040859	Gallus gallus	41.83	4.00e-77	281.00
IUUC-Gac-041667	Gasterosteus aculeatus	41.40	3.00e-69	255.00
IUUC-Gma-042718	Glycine max	88.32	0.00e+00	693.00
IUUC-Ggo-045624	Gorilla gorilla	39.12	1.00e-73	270.00
IUUC-Hsa-046505	Homo sapiens	41.83	1.00e-77	283.00
IUUC-Hvu-047228	Hordeum vulgare	79.77	2.00e-83	300.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	41.83	1.00e-77	283.00
IUUC-Lch-050492	Latimeria chalumnae	40.72	1.00e-75	276.00
IUUC-Lpe-050870	Leersia perrieri	74.13	1.00e-167	582.00
IUUC-Loc-052361	Lepisosteus oculatus	41.87	2.00e-76	279.00
IUUC-Lma-053058	Leptosphaeria maculans	23.82	3.00e-13	69.30
IUUC-Laf-053941	Loxodonta africana	41.34	2.00e-77	282.00
IUUC-Mcc-055518	Macaca mulatta	39.12	1.00e-73	270.00
IUUC-Mor-056944	Magnaporthe oryzae	26.37	1.00e-16	80.90
IUUC-Mtr-058716	Medicago truncatula	82.24	0.00e+00	626.00
IUUC-Mga-059469	Meleagris gallopavo	41.83	2.00e-77	281.00
IUUC-Mmr-061026	Microcebus murinus	39.12	1.00e-73	270.00
IUUC-Mdo-062346	Monodelphis domestica	42.11	8.00e-78	283.00
IUUC-Mmu-063785	Mus musculus	41.83	1.00e-77	283.00
IUUC-Mac-064681	Musa acuminata	85.56	0.00e+00	685.00
IUUC-Mpu-066862	Mustela putorius furo	41.83	1.00e-77	283.00
IUUC-Mlu-067103	Myotis lucifugus	39.39	7.00e-73	266.00
IUUC-Ncr-068782	Neurospora crassa	31.25	3.00e-20	93.20
IUUC-Nle-069472	Nomascus leucogenys	41.83	1.00e-77	283.00
IUUC-Opr-070376	Ochotona princeps	38.70	2.00e-42	166.00
IUUC-Ont-071513	Oreochromis niloticus	42.15	2.00e-77	282.00
IUUC-Oan-073202	Ornithorhynchus anatinus	41.83	2.00e-77	282.00
IUUC-Ocu-074012	Oryctolagus cuniculus	41.83	1.00e-77	283.00
IUUC-Oba-075030	Oryza barthii	78.61	0.00e+00	631.00
IUUC-Obr-076895	Oryza brachyantha	77.69	0.00e+00	625.00
IUUC-Ogl-077522	Oryza glaberrima	80.81	5.00e-174	603.00
IUUC-Ogu-078120	Oryza glumaepatula	74.59	3.00e-166	577.00
IUUC-Oin-079886	Oryza indica	78.34	0.00e+00	629.00
IUUC-Olo-080238	Oryza longistaminata	80.23	4.00e-178	616.00
IUUC-Ome-081823	Oryza meridionalis	73.80	4.00e-167	580.00
IUUC-Oni-082388	Oryza nivara	67.03	1.00e-150	526.00
IUUC-Opu-083537	Oryza punctata	77.89	0.00e+00	627.00
IUUC-Oru-084863	Oryza rufipogon	67.20	3.00e-154	537.00
IUUC-Osa-085622	Oryza sativa	78.07	0.00e+00	627.00
IUUC-Ola-087426	Oryzias latipes	39.30	1.00e-68	255.00
IUUC-Olu-087788	Ostreococcus lucimarinus	34.20	7.00e-56	210.00
IUUC-Oga-088228	Otolemur garnettii	41.83	1.00e-77	283.00
IUUC-Oar-090139	Ovis aries	41.83	2.00e-77	282.00
IUUC-Pan-092874	Papio anubis	41.22	5.00e-57	213.00
IUUC-Psi-093927	Pelodiscus sinensis	42.06	2.00e-77	282.00
IUUC-Pma-094740	Petromyzon marinus	41.60	3.00e-46	177.00
IUUC-Ppa-095871	Physcomitrella patens	70.65	1.00e-162	565.00
IUUC-Pfo-097208	Poecilia formosa	41.83	4.00e-77	281.00
IUUC-Pab-097658	Pongo abelii	41.83	1.00e-77	283.00
IUUC-Ppe-101807	Prunus persica	90.44	0.00e+00	702.00
IUUC-Pva-103191	Pteropus vampyrus	35.49	7.00e-60	224.00
IUUC-Pgr-103619	Puccinia graminis	28.79	3.00e-18	85.90
IUUC-Pte-104406	Pyrenophora teres	24.70	4.00e-21	95.50
IUUC-Pyt-104821	Pyrenophora triticirepentis	22.61	4.00e-14	72.40
IUUC-Rno-105854	Rattus norvegicus	41.83	1.00e-77	283.00
IUUC-Sha-107426	Sarcophilus harrisii	42.11	9.00e-78	283.00
IUUC-Smo-109638	Selaginella moellendorffii	72.29	3.00e-162	563.00
IUUC-Sit-110481	Setaria italica	77.69	1.00e-176	612.00
IUUC-Sly-111464	Solanum lycopersicum	86.61	0.00e+00	691.00
IUUC-Stu-112910	Solanum tuberosum	86.22	0.00e+00	691.00
IUUC-Sar-113754	Sorex araneus	38.57	4.00e-68	250.00
IUUC-Sbi-114023	Sorghum bicolor	77.39	4.00e-178	616.00
IUUC-Ssc-115386	Sus scrofa	41.83	1.00e-77	283.00
IUUC-Tgu-117123	Taeniopygia guttata	41.83	3.00e-77	281.00
IUUC-Tru-117720	Takifugu rubripes	40.21	8.00e-74	270.00
IUUC-Tsy-119584	Tarsius syrichta	39.12	1.00e-73	270.00
IUUC-Tni-119695	Tetraodon nigroviridis	41.32	4.00e-76	278.00
IUUC-Tca-121787	Theobroma cacao	93.21	0.00e+00	727.00
IUUC-Tvi-122409	Trichoderma virens	26.45	1.00e-17	83.60
IUUC-Tae-124454	Triticum aestivum	76.86	8.00e-176	609.00
IUUC-Tme-126906	Tuber melanosporum	31.05	3.00e-34	139.00
IUUC-Tbe-127557	Tupaia belangeri	39.28	9.00e-71	260.00
IUUC-Vda-129774	Verticillium dahliae	25.99	1.00e-16	80.50
IUUC-Vpa-130256	Vicugna pacos	34.97	5.00e-60	224.00
IUUC-Vvi-131201	Vitis vinifera	90.54	0.00e+00	714.00
IUUC-Xtr-132206	Xenopus tropicalis	41.27	7.00e-76	277.00
IUUC-Xma-134102	Xiphophorus maculatus	41.83	3.00e-77	281.00
IUUC-Zma-135593	Zea mays	77.93	1.00e-178	618.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence