iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121787

Ensembl Protein ID

EOY12576

UniProt Accession

A0A061F6B1; A0A061F6B1_THECC

Genbank Protein ID

EOY12576.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001885

Gene Name

TCM_031093

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031093	EOY12576	EOY12576
TCM_031093	EOY12578	EOY12578
TCM_031093	EOY12577	EOY12577

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-22	79.1	172	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH ++v +++f  sd ++++s++ D+t+k+W++
   Q: 172  GHRNEVLSVDFhpSDiHRIASCGMDNTVKIWSM 204
           8***********999****************97 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAKTPIGLEP VVGSLTPSKK REYRVTNRLQ EGKRPLYAVV FNFIDSRYFN VFATVGGNRV 60
TVYQCLDGGV IAVLQSYVDE DKDESFYTIS WACNIDGTPF VVAGGINGII RVIDASNEKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAACTGAAA ACTCTTGATT TTGTCTGGTC GGGAGCCAAC AAGTTTTCAA AGCAAAAATG 60
GCGAAGACGC CGATTGGGCT AGAACCAGTG GTGGGATCTC TAACACCGTC AAAGAAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

KEGG

tcc:TCM_031093

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	77.35	9.00e-176	608.00
IUUC-Aml-001510	Ailuropoda melanoleuca	41.60	1.00e-73	269.00
IUUC-Atr-002496	Amborella trichopoda	85.50	3.00e-178	616.00
IUUC-Apl-003768	Anas platyrhynchos	42.11	1.00e-76	279.00
IUUC-Aca-004382	Anolis carolinensis	42.11	4.00e-77	281.00
IUUC-Aly-005980	Arabidopsis lyrata	75.75	9.00e-178	615.00
IUUC-Ath-006579	Arabidopsis thaliana	75.20	3.00e-178	616.00
IUUC-Ame-010987	Astyanax mexicanus	42.34	4.00e-76	277.00
IUUC-Bta-013432	Bos taurus	42.11	2.00e-77	281.00
IUUC-Bci-013970	Botrytis cinerea	30.04	3.00e-23	102.00
IUUC-Bdi-014553	Brachypodium distachyon	79.61	6.00e-179	619.00
IUUC-Bol-016522	Brassica oleracea	75.20	9.00e-177	611.00
IUUC-Bra-017137	Brassica rapa	75.20	5.00e-177	612.00
IUUC-Cel-018494	Caenorhabditis elegans	26.87	5.00e-24	104.00
IUUC-Cja-019066	Callithrix jacchus	42.11	3.00e-77	281.00
IUUC-Cfa-021261	Canis familiaris	42.11	3.00e-77	281.00
IUUC-Cpo-022375	Cavia porcellus	37.95	3.00e-64	238.00
IUUC-Csa-024005	Chlorocebus sabaeus	42.11	3.00e-77	281.00
IUUC-Cho-024881	Choloepus hoffmanni	42.92	8.00e-51	193.00
IUUC-Cin-025697	Ciona intestinalis	39.44	8.00e-76	276.00
IUUC-Csv-026221	Ciona savignyi	38.74	6.00e-75	273.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	24.92	1.00e-17	84.00
IUUC-Cne-026877	Cryptococcus neoformans	28.57	3.00e-21	96.30
IUUC-Cme-027353	Cyanidioschyzon merolae	41.55	7.00e-27	114.00
IUUC-Dre-028346	Danio rerio	42.11	2.00e-76	278.00
IUUC-Dno-029319	Dasypus novemcinctus	41.83	6.00e-77	280.00
IUUC-Dor-030746	Dipodomys ordii	32.31	3.00e-48	185.00
IUUC-Dse-031324	Dothistroma septosporum	29.33	2.00e-20	92.80
IUUC-Dme-031874	Drosophila melanogaster	40.23	1.00e-73	269.00
IUUC-Ete-032880	Echinops telfairi	38.91	5.00e-40	157.00
IUUC-Eca-034272	Equus caballus	42.11	3.00e-77	281.00
IUUC-Eeu-035303	Erinaceus europaeus	38.86	8.00e-71	260.00
IUUC-Fca-036008	Felis catus	42.11	2.00e-77	281.00
IUUC-Fal-037577	Ficedula albicollis	42.11	1.00e-76	279.00
IUUC-Fso-038294	Fusarium solani	28.22	1.00e-25	110.00
IUUC-Gmo-039008	Gadus morhua	40.70	3.00e-68	251.00
IUUC-Ggr-039894	Gaeumannomyces graminis	28.09	2.00e-16	79.70
IUUC-Gga-040859	Gallus gallus	42.11	1.00e-76	279.00
IUUC-Gac-041667	Gasterosteus aculeatus	41.98	3.00e-69	254.00
IUUC-Gma-042718	Glycine max	90.33	0.00e+00	699.00
IUUC-Ggo-045624	Gorilla gorilla	39.38	3.00e-73	268.00
IUUC-Hsa-046505	Homo sapiens	42.11	3.00e-77	281.00
IUUC-Hvu-047228	Hordeum vulgare	82.08	2.00e-85	306.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	42.11	3.00e-77	281.00
IUUC-Lch-050492	Latimeria chalumnae	41.55	7.00e-76	276.00
IUUC-Lpe-050870	Leersia perrieri	75.97	7.00e-167	578.00
IUUC-Loc-052361	Lepisosteus oculatus	41.83	3.00e-76	278.00
IUUC-Lma-053058	Leptosphaeria maculans	23.75	2.00e-12	66.60
IUUC-Laf-053941	Loxodonta africana	41.62	7.00e-77	280.00
IUUC-Mcc-055518	Macaca mulatta	39.38	3.00e-73	268.00
IUUC-Mor-056944	Magnaporthe oryzae	27.00	3.00e-17	82.40
IUUC-Mtr-058716	Medicago truncatula	83.89	0.00e+00	631.00
IUUC-Mga-059469	Meleagris gallopavo	42.11	7.00e-77	280.00
IUUC-Mmr-061026	Microcebus murinus	39.38	3.00e-73	268.00
IUUC-Mdo-062346	Monodelphis domestica	42.38	2.00e-77	282.00
IUUC-Mmu-063785	Mus musculus	42.11	3.00e-77	281.00
IUUC-Mac-064681	Musa acuminata	85.83	0.00e+00	689.00
IUUC-Mpu-066862	Mustela putorius furo	42.11	3.00e-77	281.00
IUUC-Mlu-067103	Myotis lucifugus	39.66	2.00e-72	265.00
IUUC-Ncr-068782	Neurospora crassa	32.39	3.00e-20	92.80
IUUC-Nle-069472	Nomascus leucogenys	42.11	3.00e-77	281.00
IUUC-Opr-070376	Ochotona princeps	38.70	1.00e-42	166.00
IUUC-Ont-071513	Oreochromis niloticus	42.42	3.00e-77	281.00
IUUC-Oan-073202	Ornithorhynchus anatinus	42.11	3.00e-77	281.00
IUUC-Ocu-074012	Oryctolagus cuniculus	42.11	2.00e-77	281.00
IUUC-Oba-075030	Oryza barthii	80.66	0.00e+00	630.00
IUUC-Obr-076895	Oryza brachyantha	79.08	4.00e-180	622.00
IUUC-Ogl-077522	Oryza glaberrima	82.40	5.00e-175	606.00
IUUC-Ogu-078120	Oryza glumaepatula	75.69	3.00e-166	577.00
IUUC-Oin-079886	Oryza indica	80.39	0.00e+00	628.00
IUUC-Olo-080238	Oryza longistaminata	81.77	3.00e-179	620.00
IUUC-Ome-081823	Oryza meridionalis	75.69	8.00e-167	579.00
IUUC-Oni-082388	Oryza nivara	68.23	4.00e-150	524.00
IUUC-Opu-083537	Oryza punctata	79.89	0.00e+00	626.00
IUUC-Oru-084863	Oryza rufipogon	68.51	2.00e-153	535.00
IUUC-Osa-085622	Oryza sativa	80.11	0.00e+00	625.00
IUUC-Ola-087426	Oryzias latipes	40.27	1.00e-68	254.00
IUUC-Olu-087788	Ostreococcus lucimarinus	34.11	1.00e-56	213.00
IUUC-Oga-088228	Otolemur garnettii	42.11	2.00e-77	281.00
IUUC-Oar-090139	Ovis aries	42.11	5.00e-77	280.00
IUUC-Pan-092874	Papio anubis	41.60	3.00e-57	214.00
IUUC-Psi-093927	Pelodiscus sinensis	42.34	3.00e-77	281.00
IUUC-Pma-094740	Petromyzon marinus	41.60	3.00e-45	174.00
IUUC-Ppa-095871	Physcomitrella patens	72.27	5.00e-167	579.00
IUUC-Pfo-097208	Poecilia formosa	42.70	6.00e-77	280.00
IUUC-Pab-097658	Pongo abelii	42.11	3.00e-77	281.00
IUUC-Pop-098930	Populus trichocarpa	93.21	0.00e+00	727.00
IUUC-Ppe-101807	Prunus persica	91.26	0.00e+00	708.00
IUUC-Pva-103191	Pteropus vampyrus	35.75	1.00e-59	223.00
IUUC-Pgr-103619	Puccinia graminis	29.96	6.00e-20	91.30
IUUC-Pte-104406	Pyrenophora teres	24.32	5.00e-21	95.10
IUUC-Pyt-104821	Pyrenophora triticirepentis	22.19	2.00e-14	73.20
IUUC-Rno-105854	Rattus norvegicus	42.11	3.00e-77	281.00
IUUC-Sha-107426	Sarcophilus harrisii	42.38	2.00e-77	282.00
IUUC-Smo-109638	Selaginella moellendorffii	73.14	1.00e-165	575.00
IUUC-Sit-110481	Setaria italica	79.61	7.00e-178	615.00
IUUC-Sly-111464	Solanum lycopersicum	87.50	0.00e+00	698.00
IUUC-Stu-112910	Solanum tuberosum	87.77	0.00e+00	699.00
IUUC-Sar-113754	Sorex araneus	38.86	1.00e-67	248.00
IUUC-Sbi-114023	Sorghum bicolor	79.61	3.00e-178	616.00
IUUC-Ssc-115386	Sus scrofa	42.11	3.00e-77	281.00
IUUC-Tgu-117123	Taeniopygia guttata	42.11	7.00e-77	280.00
IUUC-Tru-117720	Takifugu rubripes	40.48	1.00e-73	269.00
IUUC-Tsy-119584	Tarsius syrichta	39.38	3.00e-73	268.00
IUUC-Tni-119695	Tetraodon nigroviridis	41.60	6.00e-76	276.00
IUUC-Tvi-122409	Trichoderma virens	27.69	9.00e-19	87.40
IUUC-Tae-124454	Triticum aestivum	77.35	9.00e-176	608.00
IUUC-Tme-126906	Tuber melanosporum	31.58	4.00e-34	138.00
IUUC-Tbe-127557	Tupaia belangeri	39.55	2.00e-70	258.00
IUUC-Vda-129774	Verticillium dahliae	27.75	5.00e-18	85.10
IUUC-Vpa-130256	Vicugna pacos	35.23	2.00e-59	222.00
IUUC-Vvi-131201	Vitis vinifera	91.87	0.00e+00	717.00
IUUC-Xtr-132206	Xenopus tropicalis	42.11	3.00e-76	278.00
IUUC-Xma-134102	Xiphophorus maculatus	42.70	6.00e-77	280.00
IUUC-Zma-135593	Zea mays	80.17	1.00e-178	618.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence