iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118478

UUCD1 version

UUC-TaR-01165

Ensembl Protein ID

ENSTRUP00000028573.1

UniProt Accession

H2TV64; H2TV64_TAKRU

Protein Name

Uncharacterized protein

Gene Name

usp39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000011317.1	ENSTRUT00000028688.1	ENSTRUP00000028573.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-44	154.2	162	491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsg 86
           +Gl+N+ +  Y N vLQ+  n+p+lr+++le+++ k  ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ 
   Q: 162  VGLNNIKANDYANVVLQAFCNVPPLRNFFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSKKnFQI 250
           6******************************9999999999********************999999**************99999*** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclec 159
           ++q Da +f++++l++l+ +l                           +kk++s+++++Fqg+++                + + + e 
   Q: 251  TKQGDAVDFMTWFLNALHGAL-------------------------GGTKKKPSILTKVFQGSMRiftkklphpdlmpeekEALLVTEE 314
           *********************.........................4567777888888888888777888888888877799999999 PP
   S: 160  dnvssreepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
            +++ +e++fl l+l++p     k e          l ++L++f  + e e    y++ k     +  k+++l+klP++L++ +kRf  
   Q: 315  YQEQMSESTFLFLTLDLPTAPLYKDEkeqliipqvPLFNILAKFNGNTEKE----YKTYKE----NFLKRFQLTKLPPYLVFCIKRF-- 393
           9999**************777665555566778888888888888888777....554443....4899******************.. PP
   S: 240  seeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleet 326
           ++++ + ek+ + v+fp++ +dl++++t++ + ++++++Y+L+a +vH G++ +G Y  +v +  +gkW+++ D +V  +  + +    
   Q: 394  TKNNFFVEKNPTIVNFPITnVDLREYLTEEAQVSEKNTTYDLVANIVHDGKPTEGAYRIHVLHhGTGKWYEMQDLQVIDILPQMITL-- 480
           88889********************************************************9935666******************9.. PP
   S: 327  gstaYvlfYkrr 338
            s+aY+ ++kr+
   Q: 481  -SEAYIQIWKRQ 491
           .********986 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

SIMMVSLKRE REDEVDDDDN EETVSSKVRR GRVVEDKRSR HCPYLDTINR SVLDFDFEKL 60
CSISLSHINV YACLICGKYF QGRGLKSHAY THSVQFTHHV FLNLNTLKFY CLPDNYEIID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCATAATGA TGGTTTCTCT AAAGAGAGAA AGAGAAGATG AGGTGGATGA TGATGACAAC 60
GAAGAAACAG GCAAGTGTAT GTTTACTTAC GGATGTCCGA CGTTTCATGC CCGGTTGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0048855--P:adenohypophysis morphogenesis
GO:0016579--P:protein deubiquitination
GO:0043484--P:regulation of RNA splicing
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	53.65	3.00e-129	455.00
IUUC-Aml-001846	Ailuropoda melanoleuca	86.58	0.00e+00	862.00
IUUC-Atr-002758	Amborella trichopoda	51.50	5.00e-131	461.00
IUUC-Apl-003336	Anas platyrhynchos	80.84	2.00e-156	545.00
IUUC-Aca-004846	Anolis carolinensis	88.13	0.00e+00	828.00
IUUC-Aly-005683	Arabidopsis lyrata	51.96	2.00e-121	429.00
IUUC-Ath-007661	Arabidopsis thaliana	50.63	4.00e-121	428.00
IUUC-Ago-007802	Ashbya gossypii	31.02	2.00e-58	220.00
IUUC-Acl-008304	Aspergillus clavatus	42.38	2.00e-92	333.00
IUUC-Afl-008735	Aspergillus flavus	58.82	2.00e-40	160.00
IUUC-Afu-009100	Aspergillus fumigatus	41.29	3.00e-91	329.00
IUUC-Ani-009138	Aspergillus nidulans	48.90	4.00e-95	342.00
IUUC-Ang-009661	Aspergillus niger	45.20	3.00e-97	348.00
IUUC-Aor-010235	Aspergillus oryzae	44.25	6.00e-80	291.00
IUUC-Ate-010346	Aspergillus terreus	37.75	1.00e-73	271.00
IUUC-Ame-011688	Astyanax mexicanus	91.74	0.00e+00	884.00
IUUC-Bgr-011998	Blumeria graminis	46.49	2.00e-114	406.00
IUUC-Bta-013407	Bos taurus	86.58	0.00e+00	860.00
IUUC-Bci-013977	Botrytis cinerea	47.61	3.00e-115	408.00
IUUC-Bdi-014361	Brachypodium distachyon	52.92	1.00e-133	470.00
IUUC-Bol-015968	Brassica oleracea	51.52	3.00e-120	425.00
IUUC-Bra-017952	Brassica rapa	51.74	2.00e-121	429.00
IUUC-Cel-018491	Caenorhabditis elegans	63.71	0.00e+00	630.00
IUUC-Cja-019134	Callithrix jacchus	86.58	0.00e+00	861.00
IUUC-Cfa-020098	Canis familiaris	86.58	0.00e+00	860.00
IUUC-Cpo-021595	Cavia porcellus	86.37	0.00e+00	857.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	50.00	1.00e-30	124.00
IUUC-Csa-024121	Chlorocebus sabaeus	86.58	0.00e+00	860.00
IUUC-Cho-025057	Choloepus hoffmanni	70.44	7.00e-79	287.00
IUUC-Cin-025473	Ciona intestinalis	61.32	2.00e-61	228.00
IUUC-Csv-025815	Ciona savignyi	79.75	1.00e-118	419.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	44.11	4.00e-110	391.00
IUUC-Cne-026802	Cryptococcus neoformans	42.83	5.00e-101	361.00
IUUC-Dre-027870	Danio rerio	91.90	0.00e+00	879.00
IUUC-Dno-029655	Dasypus novemcinctus	86.37	0.00e+00	860.00
IUUC-Dor-030762	Dipodomys ordii	86.58	0.00e+00	859.00
IUUC-Dse-031441	Dothistroma septosporum	44.95	2.00e-109	389.00
IUUC-Dme-032101	Drosophila melanogaster	64.35	2.00e-179	621.00
IUUC-Ete-032841	Echinops telfairi	82.81	0.00e+00	819.00
IUUC-Eca-033463	Equus caballus	86.58	0.00e+00	859.00
IUUC-Eeu-034438	Erinaceus europaeus	62.89	3.00e-168	585.00
IUUC-Fca-035774	Felis catus	86.58	0.00e+00	860.00
IUUC-Fal-036988	Ficedula albicollis	86.34	0.00e+00	864.00
IUUC-Fox-037895	Fusarium oxysporum	44.92	1.00e-106	380.00
IUUC-Fso-038450	Fusarium solani	45.03	1.00e-107	383.00
IUUC-Gmo-038874	Gadus morhua	89.30	0.00e+00	869.00
IUUC-Ggr-040115	Gaeumannomyces graminis	41.41	7.00e-104	371.00
IUUC-Gac-041650	Gasterosteus aculeatus	93.31	0.00e+00	924.00
IUUC-Gma-043697	Glycine max	51.88	9.00e-133	467.00
IUUC-Ggo-044707	Gorilla gorilla	80.71	0.00e+00	783.00
IUUC-Hsa-046041	Homo sapiens	86.58	0.00e+00	859.00
IUUC-Hvu-047816	Hordeum vulgare	51.51	8.00e-123	434.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	86.43	2.00e-173	601.00
IUUC-Lch-050419	Latimeria chalumnae	88.41	0.00e+00	869.00
IUUC-Lpe-051593	Leersia perrieri	53.40	6.00e-135	474.00
IUUC-Loc-052930	Lepisosteus oculatus	88.78	0.00e+00	890.00
IUUC-Lma-053256	Leptosphaeria maculans	46.97	1.00e-113	403.00
IUUC-Laf-053555	Loxodonta africana	86.37	0.00e+00	855.00
IUUC-Mcc-055630	Macaca mulatta	86.58	0.00e+00	860.00
IUUC-Meu-056579	Macropus eugenii	83.33	1.00e-157	550.00
IUUC-Mor-057078	Magnaporthe oryzae	45.18	8.00e-107	380.00
IUUC-Mpo-057607	Magnaporthe poae	37.76	3.00e-83	302.00
IUUC-Mtr-058644	Medicago truncatula	52.25	4.00e-130	458.00
IUUC-Mla-059120	Melampsora laricipopulina	41.20	1.00e-97	350.00
IUUC-Mvi-060429	Microbotryum violaceum	46.00	7.00e-70	258.00
IUUC-Mmr-061313	Microcebus murinus	86.37	0.00e+00	858.00
IUUC-Mdo-062801	Monodelphis domestica	87.00	0.00e+00	863.00
IUUC-Mmu-064424	Mus musculus	86.79	0.00e+00	875.00
IUUC-Mac-064694	Musa acuminata	52.90	6.00e-131	461.00
IUUC-Mpu-065980	Mustela putorius furo	87.41	0.00e+00	757.00
IUUC-Mlu-067007	Myotis lucifugus	86.58	0.00e+00	857.00
IUUC-Nfi-068274	Neosartorya fischeri	41.29	2.00e-91	329.00
IUUC-Ncr-068829	Neurospora crassa	47.20	9.00e-108	384.00
IUUC-Nle-069171	Nomascus leucogenys	86.76	0.00e+00	856.00
IUUC-Opr-070494	Ochotona princeps	79.45	0.00e+00	764.00
IUUC-Ont-072290	Oreochromis niloticus	92.40	0.00e+00	946.00
IUUC-Oan-073099	Ornithorhynchus anatinus	86.97	0.00e+00	856.00
IUUC-Ocu-074642	Oryctolagus cuniculus	86.58	0.00e+00	860.00
IUUC-Oba-075886	Oryza barthii	53.26	1.00e-135	476.00
IUUC-Obr-076220	Oryza brachyantha	53.05	9.00e-136	477.00
IUUC-Ogl-077682	Oryza glaberrima	53.67	8.00e-136	477.00
IUUC-Ogu-078492	Oryza glumaepatula	53.46	2.00e-135	475.00
IUUC-Oin-079956	Oryza indica	53.25	2.00e-135	476.00
IUUC-Olo-080239	Oryza longistaminata	48.12	2.00e-107	384.00
IUUC-Ome-081573	Oryza meridionalis	53.67	5.00e-136	478.00
IUUC-Oni-082975	Oryza nivara	53.25	2.00e-135	476.00
IUUC-Opu-083724	Oryza punctata	53.46	1.00e-135	476.00
IUUC-Oru-084566	Oryza rufipogon	53.67	9.00e-136	476.00
IUUC-Osa-086008	Oryza sativa	53.67	1.00e-135	476.00
IUUC-Ola-086967	Oryzias latipes	92.46	0.00e+00	910.00
IUUC-Olu-087614	Ostreococcus lucimarinus	42.39	1.00e-96	346.00
IUUC-Oga-088047	Otolemur garnettii	75.61	2.00e-158	551.00
IUUC-Oar-089393	Ovis aries	86.58	0.00e+00	860.00
IUUC-Ptr-090561	Pan troglodytes	86.58	0.00e+00	860.00
IUUC-Pan-091812	Papio anubis	86.58	0.00e+00	861.00
IUUC-Psi-093507	Pelodiscus sinensis	86.82	2.00e-149	521.00
IUUC-Pno-095104	Phaeosphaeria nodorum	46.32	4.00e-110	391.00
IUUC-Ppa-095995	Physcomitrella patens	53.00	1.00e-135	476.00
IUUC-Pfo-096754	Poecilia formosa	92.14	0.00e+00	930.00
IUUC-Pab-098053	Pongo abelii	86.58	0.00e+00	860.00
IUUC-Pop-099230	Populus trichocarpa	52.59	2.00e-135	476.00
IUUC-Pca-100407	Procavia capensis	79.25	0.00e+00	764.00
IUUC-Ppe-101699	Prunus persica	52.02	5.00e-132	464.00
IUUC-Pva-103159	Pteropus vampyrus	84.28	0.00e+00	814.00
IUUC-Pgr-103433	Puccinia graminis	41.80	3.00e-103	369.00
IUUC-Ptt-103701	Puccinia triticina	39.06	7.00e-92	331.00
IUUC-Pte-104281	Pyrenophora teres	47.17	7.00e-113	400.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	47.17	1.00e-112	400.00
IUUC-Rno-105531	Rattus norvegicus	87.00	0.00e+00	877.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.98	1.00e-44	174.00
IUUC-Sha-107093	Sarcophilus harrisii	86.82	0.00e+00	859.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	43.97	2.00e-115	409.00
IUUC-Spo-108018	Schizosaccharomyces pombe	46.17	1.00e-111	396.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	45.59	2.00e-106	379.00
IUUC-Smo-108892	Selaginella moellendorffii	52.49	1.00e-133	469.00
IUUC-Sit-110782	Setaria italica	53.98	2.00e-137	482.00
IUUC-Sly-111308	Solanum lycopersicum	52.74	2.00e-141	495.00
IUUC-Stu-112447	Solanum tuberosum	52.95	3.00e-142	498.00
IUUC-Sar-113352	Sorex araneus	80.48	0.00e+00	687.00
IUUC-Sbi-114806	Sorghum bicolor	54.09	4.00e-135	474.00
IUUC-Sre-115059	Sporisorium reilianum	39.96	3.00e-92	332.00
IUUC-Ssc-115677	Sus scrofa	85.59	8.00e-173	599.00
IUUC-Tsy-119082	Tarsius syrichta	76.19	0.00e+00	644.00
IUUC-Tni-120419	Tetraodon nigroviridis	97.01	0.00e+00	976.00
IUUC-Tca-121294	Theobroma cacao	52.08	3.00e-139	488.00
IUUC-Tre-121962	Trichoderma reesei	45.38	1.00e-103	370.00
IUUC-Tvi-122280	Trichoderma virens	45.26	2.00e-111	396.00
IUUC-Tae-125873	Triticum aestivum	54.64	1.00e-135	476.00
IUUC-Tur-126551	Triticum urartu	54.64	1.00e-135	476.00
IUUC-Tme-126959	Tuber melanosporum	47.28	2.00e-116	412.00
IUUC-Tbe-127737	Tupaia belangeri	87.39	0.00e+00	822.00
IUUC-Ttr-129211	Tursiops truncatus	88.35	2.00e-135	476.00
IUUC-Uma-129591	Ustilago maydis	39.47	3.00e-96	346.00
IUUC-Vda-129674	Verticillium dahliae	43.13	6.00e-95	341.00
IUUC-Vpa-130793	Vicugna pacos	81.86	0.00e+00	757.00
IUUC-Xtr-132430	Xenopus tropicalis	85.50	0.00e+00	835.00
IUUC-Xma-133515	Xiphophorus maculatus	94.34	0.00e+00	915.00
IUUC-Yli-134488	Yarrowia lipolytica	37.09	3.00e-75	275.00
IUUC-Zma-134748	Zea mays	54.51	9.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence