iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069900

Ensembl Protein ID

ENSNLEP00000013359.2

UniProt Accession

G1RJF2; G1RJF2_NOMLE

Genbank Protein ID

ENSNLEP00000013359

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01105190

Gene Name

ARPC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000010852.2	ENSNLET00000014013.1	ENSNLEP00000013359.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-14	51.9	104	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++ +t++++ +  +++v+++ D + +vW+ ++gv
   Q: 104  HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKDGV 138
           9999*******6669**************988776 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

FRDLSAAPSG LPSSARARRS LFASTAQSPR ILRSEPVRTP PIPAFSPLKT LRIMSLHQFL 60
LEPITCHAWN RDRTQIALSP NNHEVHIYKK NGSQWVKAHE LKEHNGHITG IDWAPKSDRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCCGGGA TCTGTCTGCC GCTCCCTCTG GGCTTCCGTC CTCCGCCCGC GCCCGCCGGA 60
GCCTGTTCGC GTCGACTGCC CAGAGTCCGC GAATCCTCCG CTCCGAGCCC GTCCGGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.04	1.00e-62	233.00
IUUC-Aml-002044	Ailuropoda melanoleuca	100.00	0.00e+00	742.00
IUUC-Atr-002844	Amborella trichopoda	51.89	2.00e-55	209.00
IUUC-Apl-003325	Anas platyrhynchos	95.14	0.00e+00	744.00
IUUC-Aca-004736	Anolis carolinensis	95.14	0.00e+00	743.00
IUUC-Aly-005532	Arabidopsis lyrata	41.64	1.00e-79	289.00
IUUC-Ath-006683	Arabidopsis thaliana	41.91	1.00e-79	289.00
IUUC-Ago-007966	Ashbya gossypii	38.85	4.00e-66	244.00
IUUC-Acl-008334	Aspergillus clavatus	46.67	5.00e-92	330.00
IUUC-Afl-008485	Aspergillus flavus	46.52	4.00e-89	322.00
IUUC-Afu-008780	Aspergillus fumigatus	46.39	5.00e-93	334.00
IUUC-Ani-009417	Aspergillus nidulans	47.63	2.00e-93	335.00
IUUC-Ang-009543	Aspergillus niger	48.75	6.00e-95	340.00
IUUC-Aor-010234	Aspergillus oryzae	46.80	8.00e-91	327.00
IUUC-Ate-010386	Aspergillus terreus	47.63	2.00e-95	342.00
IUUC-Ame-011852	Astyanax mexicanus	91.08	0.00e+00	716.00
IUUC-Bgr-012192	Blumeria graminis	43.33	1.00e-83	303.00
IUUC-Bta-012530	Bos taurus	99.73	0.00e+00	741.00
IUUC-Bci-013616	Botrytis cinerea	44.44	1.00e-87	316.00
IUUC-Bdi-014632	Brachypodium distachyon	43.09	4.00e-78	285.00
IUUC-Bol-016274	Brassica oleracea	42.33	1.00e-81	296.00
IUUC-Bra-016790	Brassica rapa	41.84	2.00e-80	292.00
IUUC-Cel-018122	Caenorhabditis elegans	57.38	2.00e-113	401.00
IUUC-Cja-019362	Callithrix jacchus	99.00	0.00e+00	794.00
IUUC-Cfa-020167	Canis familiaris	99.25	0.00e+00	797.00
IUUC-Cpo-021933	Cavia porcellus	95.05	0.00e+00	764.00
IUUC-Csa-023277	Chlorocebus sabaeus	76.94	2.00e-176	611.00
IUUC-Cho-024449	Choloepus hoffmanni	75.83	4.00e-99	354.00
IUUC-Cin-025186	Ciona intestinalis	56.49	2.00e-118	419.00
IUUC-Csv-026275	Ciona savignyi	55.87	4.00e-114	404.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	44.57	3.00e-88	318.00
IUUC-Cne-026926	Cryptococcus neoformans	45.91	6.00e-98	350.00
IUUC-Dre-028057	Danio rerio	90.54	0.00e+00	711.00
IUUC-Dno-029092	Dasypus novemcinctus	98.62	0.00e+00	719.00
IUUC-Dor-030391	Dipodomys ordii	98.88	0.00e+00	711.00
IUUC-Dse-031574	Dothistroma septosporum	44.66	4.00e-83	301.00
IUUC-Dme-031907	Drosophila melanogaster	56.95	1.00e-124	439.00
IUUC-Eca-034074	Equus caballus	99.74	0.00e+00	760.00
IUUC-Eeu-035041	Erinaceus europaeus	83.68	3.00e-94	338.00
IUUC-Fca-036154	Felis catus	100.00	0.00e+00	742.00
IUUC-Fal-037279	Ficedula albicollis	95.14	0.00e+00	743.00
IUUC-Fox-037842	Fusarium oxysporum	45.96	3.00e-88	318.00
IUUC-Fso-038276	Fusarium solani	45.68	4.00e-88	318.00
IUUC-Gmo-039673	Gadus morhua	83.50	0.00e+00	650.00
IUUC-Ggr-039762	Gaeumannomyces graminis	44.44	4.00e-87	314.00
IUUC-Gga-040189	Gallus gallus	95.95	0.00e+00	748.00
IUUC-Gac-042531	Gasterosteus aculeatus	84.54	0.00e+00	657.00
IUUC-Gma-042803	Glycine max	42.48	2.00e-79	288.00
IUUC-Hsa-046309	Homo sapiens	100.00	0.00e+00	742.00
IUUC-Hvu-047456	Hordeum vulgare	29.78	7.00e-16	76.60
IUUC-Itr-047864	Ictidomys tridecemlineatus	100.00	0.00e+00	742.00
IUUC-Kpa-049288	Komagataella pastoris	40.38	5.00e-75	274.00
IUUC-Lch-050427	Latimeria chalumnae	89.76	0.00e+00	707.00
IUUC-Lpe-050869	Leersia perrieri	41.21	5.00e-77	281.00
IUUC-Loc-052532	Lepisosteus oculatus	91.67	0.00e+00	691.00
IUUC-Lma-053109	Leptosphaeria maculans	45.30	8.00e-88	317.00
IUUC-Laf-054271	Loxodonta africana	99.73	0.00e+00	741.00
IUUC-Mcc-054857	Macaca mulatta	98.64	0.00e+00	717.00
IUUC-Meu-056540	Macropus eugenii	92.82	0.00e+00	627.00
IUUC-Mor-057167	Magnaporthe oryzae	42.78	2.00e-84	305.00
IUUC-Mtr-057659	Medicago truncatula	43.65	7.00e-82	297.00
IUUC-Mla-058886	Melampsora laricipopulina	44.16	9.00e-91	327.00
IUUC-Mga-059327	Meleagris gallopavo	95.95	0.00e+00	748.00
IUUC-Mvi-060302	Microbotryum violaceum	46.41	4.00e-94	338.00
IUUC-Mmr-060765	Microcebus murinus	98.37	0.00e+00	721.00
IUUC-Mdo-062326	Monodelphis domestica	95.81	0.00e+00	741.00
IUUC-Mmu-063819	Mus musculus	98.65	0.00e+00	737.00
IUUC-Mac-064632	Musa acuminata	42.12	5.00e-81	294.00
IUUC-Mlu-067184	Myotis lucifugus	99.73	0.00e+00	739.00
IUUC-Nfi-068383	Neosartorya fischeri	46.67	6.00e-93	333.00
IUUC-Ncr-068777	Neurospora crassa	43.41	9.00e-87	313.00
IUUC-Opr-070386	Ochotona princeps	90.27	0.00e+00	652.00
IUUC-Ont-071283	Oreochromis niloticus	88.92	0.00e+00	656.00
IUUC-Oan-073139	Ornithorhynchus anatinus	95.95	0.00e+00	718.00
IUUC-Ocu-074340	Oryctolagus cuniculus	100.00	0.00e+00	742.00
IUUC-Oba-075379	Oryza barthii	41.48	4.00e-77	281.00
IUUC-Obr-076404	Oryza brachyantha	41.37	4.00e-78	284.00
IUUC-Ogl-077409	Oryza glaberrima	38.63	3.00e-70	258.00
IUUC-Ogu-078759	Oryza glumaepatula	41.48	5.00e-77	281.00
IUUC-Oin-079118	Oryza indica	41.37	2.00e-77	282.00
IUUC-Olo-081055	Oryza longistaminata	41.90	1.00e-66	246.00
IUUC-Ome-081281	Oryza meridionalis	41.48	6.00e-77	281.00
IUUC-Oni-083043	Oryza nivara	41.48	4.00e-77	281.00
IUUC-Opu-083392	Oryza punctata	33.52	4.00e-54	205.00
IUUC-Oru-084839	Oryza rufipogon	41.48	4.00e-77	281.00
IUUC-Osa-085377	Oryza sativa	41.37	2.00e-77	282.00
IUUC-Ola-087274	Oryzias latipes	87.33	0.00e+00	637.00
IUUC-Oga-088016	Otolemur garnettii	99.46	0.00e+00	739.00
IUUC-Oar-090122	Ovis aries	98.50	0.00e+00	791.00
IUUC-Ptr-091548	Pan troglodytes	100.00	0.00e+00	742.00
IUUC-Psi-093767	Pelodiscus sinensis	95.14	0.00e+00	743.00
IUUC-Pma-094124	Petromyzon marinus	77.66	0.00e+00	628.00
IUUC-Pno-095031	Phaeosphaeria nodorum	45.33	6.00e-88	317.00
IUUC-Ppa-095858	Physcomitrella patens	45.53	4.00e-86	311.00
IUUC-Pfo-097107	Poecilia formosa	88.38	0.00e+00	651.00
IUUC-Pop-098954	Populus trichocarpa	37.50	6.00e-43	167.00
IUUC-Ppe-101681	Prunus persica	42.09	3.00e-79	288.00
IUUC-Pva-102908	Pteropus vampyrus	97.99	0.00e+00	654.00
IUUC-Pgr-103309	Puccinia graminis	44.64	9.00e-92	330.00
IUUC-Ptt-103959	Puccinia triticina	44.84	8.00e-94	337.00
IUUC-Pte-104384	Pyrenophora teres	46.24	4.00e-87	314.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	46.24	6.00e-87	313.00
IUUC-Rno-105008	Rattus norvegicus	98.78	0.00e+00	648.00
IUUC-Sce-106411	Saccharomyces cerevisiae	37.02	1.00e-66	246.00
IUUC-Sha-106691	Sarcophilus harrisii	92.46	0.00e+00	741.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	45.68	2.00e-87	315.00
IUUC-Spo-108053	Schizosaccharomyces pombe	44.77	1.00e-88	320.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	44.72	6.00e-88	317.00
IUUC-Smo-108836	Selaginella moellendorffii	46.28	5.00e-84	304.00
IUUC-Sit-110150	Setaria italica	42.39	2.00e-79	289.00
IUUC-Sly-111048	Solanum lycopersicum	41.18	1.00e-76	280.00
IUUC-Sar-113599	Sorex araneus	85.47	2.00e-172	597.00
IUUC-Sbi-114685	Sorghum bicolor	43.32	1.00e-76	280.00
IUUC-Sre-115090	Sporisorium reilianum	46.08	5.00e-97	347.00
IUUC-Ssc-115851	Sus scrofa	99.46	0.00e+00	740.00
IUUC-Tgu-116701	Taeniopygia guttata	95.14	0.00e+00	743.00
IUUC-Tru-117603	Takifugu rubripes	87.23	0.00e+00	658.00
IUUC-Tsy-119515	Tarsius syrichta	89.58	8.00e-75	273.00
IUUC-Tni-119844	Tetraodon nigroviridis	89.46	0.00e+00	654.00
IUUC-Tca-121645	Theobroma cacao	42.86	7.00e-80	290.00
IUUC-Tre-122045	Trichoderma reesei	44.85	2.00e-86	311.00
IUUC-Tvi-122523	Trichoderma virens	45.00	5.00e-87	314.00
IUUC-Tae-125810	Triticum aestivum	37.07	5.00e-70	258.00
IUUC-Tur-126640	Triticum urartu	39.50	6.00e-67	247.00
IUUC-Tme-127018	Tuber melanosporum	44.93	9.00e-85	306.00
IUUC-Tbe-127321	Tupaia belangeri	99.69	0.00e+00	652.00
IUUC-Ttr-128178	Tursiops truncatus	99.14	0.00e+00	686.00
IUUC-Uma-129423	Ustilago maydis	45.81	2.00e-98	352.00
IUUC-Vda-129706	Verticillium dahliae	45.30	3.00e-88	318.00
IUUC-Vvi-131647	Vitis vinifera	43.01	7.00e-79	287.00
IUUC-Xtr-132735	Xenopus tropicalis	84.64	0.00e+00	632.00
IUUC-Xma-133435	Xiphophorus maculatus	88.38	0.00e+00	651.00
IUUC-Yli-134471	Yarrowia lipolytica	46.07	8.00e-82	296.00
IUUC-Zma-135615	Zea mays	42.04	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence