iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114561

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G476600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g044650	Sb01g044650.1	Sb01g044650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.5	145	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  f   +d ++vlp C Hvfh dC+  w        ++ +CPlCr
   Q: 145  CAVCLAAFedrDD-LRVLPaCCHVFHPDCIDPW------LAGAVTCPLCR 187
           ****999966455.*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARRRTASPL AALFLLLLST AARPSLAQPS NTTIVDHHSR TAVGGFTPTT VIVLVALISA 60
FVILTVFSIY INRCAPTRAP PPRRSPSRYA PPDHHHAAAA AGAVVHPERR ARAGLDREVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCGCGCC CGCGTAATTA CACTTGCCGT TCCTTGAAAA CCTCTCTCTT TCTCTCCCCG 60
ATTCCCCACA GGCCACAGGC AAAGATTTCT CCGGTGTCCG GCCGCCCCTC GCCGGAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g044650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013936	Botrytis cinerea	34.01	1.00e-14	73.60
IUUC-Bdi-014406	Brachypodium distachyon	52.30	1.00e-56	213.00
IUUC-Fox-037754	Fusarium oxysporum	51.56	1.00e-12	65.10
IUUC-Hvu-047314	Hordeum vulgare	61.89	6.00e-79	286.00
IUUC-Lma-053286	Leptosphaeria maculans	61.22	1.00e-12	67.00
IUUC-Oba-075624	Oryza barthii	62.43	4.00e-85	307.00
IUUC-Ogl-077561	Oryza glaberrima	62.43	4.00e-85	307.00
IUUC-Ogu-078979	Oryza glumaepatula	64.61	5.00e-91	326.00
IUUC-Oin-079867	Oryza indica	62.99	4.00e-85	307.00
IUUC-Ome-082002	Oryza meridionalis	62.71	1.00e-84	305.00
IUUC-Oni-082907	Oryza nivara	62.89	2.00e-84	305.00
IUUC-Opu-083606	Oryza punctata	62.99	1.00e-80	292.00
IUUC-Oru-084194	Oryza rufipogon	62.99	4.00e-85	307.00
IUUC-Osa-085687	Oryza sativa	62.99	4.00e-85	307.00
IUUC-Sit-109855	Setaria italica	71.43	2.00e-99	354.00
IUUC-Tae-124739	Triticum aestivum	61.03	6.00e-79	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence