iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d037246	Zm00001d037246_T001	Zm00001d037246_T001
Zm00001d037246	Zm00001d037246_T002	Zm00001d037246_T002
Zm00001d037246	Zm00001d037246_T006	Zm00001d037246_T006
Zm00001d037246	Zm00001d037246_T003	Zm00001d037246_T003
Zm00001d037246	Zm00001d037246_T009	Zm00001d037246_T009

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/DCUN1	4.90e-84	283.1	54	240
UBD/Alpha-Helix/UBA	1.30e-06	30.3	10	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/DCUN1

   S: 2    skkkleelferYkdpqedligieglekfcedlgvdpediavLvlawkleaatlcefsreefldgltalgcdsieklqeklktleselkde 91
           ++++le++f+rYk+p+ d+i +eg+++fc+dl+vdp+di++Lv++w+++aat+cef+r+ef+ gl+++g+dsiek++ kl++l+ elkd 
   Q: 54   NTRHLEDIFNRYKEPDADMIMVEGISQFCNDLQVDPQDIVMLVISWHMKAATMCEFTRQEFIGGLQSIGVDSIEKFRGKLPSLRAELKDD 143
           6799************************************************************************************** PP
   S: 92   qkfkdiYrfafnfakdkgqksldldtaialwkLllaerefklldawlkfLeeekkksiskDtWnllLefskviakdlsnYdeegaWPvli 181
           +kf+diY+faf++a++kgqksl l+tai +w+Ll+aer+++lld+w++fL+ +++k+is+DtW +lLef k+ +++lsnYd+egaWP+li
   Q: 144  NKFRDIYNFAFTWAREKGQKSLSLETAIGMWQLLFAERNWPLLDHWCQFLQVRHNKAISRDTWSQLLEFVKTTDPQLSNYDDEGAWPYLI 233
           ****************************************************************************************** PP
   S: 182  Defveyl 188
           Defveyl
   Q: 234  DEFVEYL 240
           *****96 PP

UBD/Alpha-Helix/UBA

   S: 5    dkleqlve.MGFdreealqaLraannnleaAveyLld 40
           dk++q++  +G +++ alqaL a++++le A +++++
   Q: 10   DKVQQFMTiTGASEKVALQALKASDWHLEGAFDFFYS 46
           8********************************9987 PP

Organism

Zea mays

Functional Description
(View)

Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Protein Sequence
(Fasta)

MYKLGRGNRD KVQQFMTITG ASEKVALQAL KASDWHLEGA FDFFYSQPQV SVVNTRHLED 60
IFNRYKEPDA DMIMVEGISQ FCNDLQVDPQ DIVMLVISWH MKAATMCEFT RQEFIGGLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATACACAC ACACACGCGC TGGTTTAGAC TCAGCACACA GCATTCATTC AGCTAGCGAG 60
CGAGAGAGAG GGGAACAAAA AGGAGGGGCG AGGAGGACAG GGAGCCGAGC GCAAGAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014764--DCN-prot
IPR005176--PONY_dom
IPR009060--UBA-like

PROSITE

PS51229--DCUN1

Pfam

PF03556--Cullin_binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000561	Aegilops tauschii	87.60	1.00e-134	471.00
IUUC-Aml-001879	Ailuropoda melanoleuca	44.08	2.00e-61	228.00
IUUC-Atr-002697	Amborella trichopoda	79.82	3.00e-52	196.00
IUUC-Aca-005269	Anolis carolinensis	44.94	1.00e-61	229.00
IUUC-Acl-008172	Aspergillus clavatus	30.65	1.00e-30	126.00
IUUC-Afl-008569	Aspergillus flavus	34.24	8.00e-37	146.00
IUUC-Afu-009005	Aspergillus fumigatus	30.60	7.00e-22	96.30
IUUC-Ang-009664	Aspergillus niger	32.94	7.00e-33	133.00
IUUC-Aor-009902	Aspergillus oryzae	29.50	2.00e-12	64.30
IUUC-Ate-010414	Aspergillus terreus	32.30	3.00e-35	141.00
IUUC-Bgr-011991	Blumeria graminis	30.99	2.00e-22	99.00
IUUC-Bta-013561	Bos taurus	43.10	9.00e-57	212.00
IUUC-Bdi-014138	Brachypodium distachyon	86.00	4.00e-132	462.00
IUUC-Cfa-020523	Canis familiaris	43.53	3.00e-57	214.00
IUUC-Cre-022620	Chlamydomonas reinhardtii	46.09	2.00e-66	244.00
IUUC-Cho-024373	Choloepus hoffmanni	43.67	8.00e-58	216.00
IUUC-Cin-025269	Ciona intestinalis	46.56	4.00e-64	237.00
IUUC-Csv-025976	Ciona savignyi	36.77	8.00e-35	139.00
IUUC-Cgl-026386	Colletotrichum gloeosporioides	29.83	2.00e-22	98.20
IUUC-Cme-027199	Cyanidioschyzon merolae	31.54	7.00e-10	57.40
IUUC-Dse-031365	Dothistroma septosporum	28.34	7.00e-28	117.00
IUUC-Dme-032197	Drosophila melanogaster	43.10	9.00e-58	216.00
IUUC-Ete-032371	Echinops telfairi	44.08	2.00e-61	228.00
IUUC-Eca-033242	Equus caballus	44.08	2.00e-61	228.00
IUUC-Eeu-035317	Erinaceus europaeus	44.49	9.00e-62	229.00
IUUC-Fca-036061	Felis catus	43.72	2.00e-61	228.00
IUUC-Ggr-039959	Gaeumannomyces graminis	26.07	1.00e-15	77.80
IUUC-Gma-043545	Glycine max	75.40	1.00e-117	414.00
IUUC-Hvu-047636	Hordeum vulgare	37.10	9.00e-21	92.40
IUUC-Itr-047902	Ictidomys tridecemlineatus	47.15	9.00e-63	232.00
IUUC-Lpe-051540	Leersia perrieri	88.76	6.00e-137	479.00
IUUC-Lma-053103	Leptosphaeria maculans	30.65	2.00e-29	122.00
IUUC-Meu-056535	Macropus eugenii	45.03	4.00e-47	181.00
IUUC-Mor-056909	Magnaporthe oryzae	28.68	3.00e-23	101.00
IUUC-Mtr-057964	Medicago truncatula	73.90	8.00e-115	405.00
IUUC-Mla-058990	Melampsora laricipopulina	26.87	6.00e-19	87.80
IUUC-Mmr-060851	Microcebus murinus	44.08	2.00e-61	228.00
IUUC-Mdo-063074	Monodelphis domestica	44.08	7.00e-61	228.00
IUUC-Mmu-063816	Mus musculus	46.15	2.00e-63	234.00
IUUC-Mac-065016	Musa acuminata	81.42	3.00e-91	327.00
IUUC-Mpu-066870	Mustela putorius furo	43.53	3.00e-57	214.00
IUUC-Mlu-067701	Myotis lucifugus	43.67	2.00e-60	224.00
IUUC-Nfi-068610	Neosartorya fischeri	30.60	6.00e-22	96.30
IUUC-Opr-070682	Ochotona princeps	45.74	2.00e-47	182.00
IUUC-Oan-073031	Ornithorhynchus anatinus	44.49	1.00e-61	229.00
IUUC-Ocu-074648	Oryctolagus cuniculus	44.08	2.00e-61	228.00
IUUC-Oba-074993	Oryza barthii	89.20	1.00e-137	481.00
IUUC-Obr-076341	Oryza brachyantha	88.00	3.00e-136	476.00
IUUC-Ogl-077099	Oryza glaberrima	89.20	1.00e-137	481.00
IUUC-Ogu-078285	Oryza glumaepatula	88.40	1.00e-136	478.00
IUUC-Oin-079441	Oryza indica	89.20	4.00e-138	482.00
IUUC-Olo-081037	Oryza longistaminata	89.20	4.00e-138	482.00
IUUC-Ome-081357	Oryza meridionalis	89.20	4.00e-138	482.00
IUUC-Oni-082632	Oryza nivara	89.20	3.00e-138	483.00
IUUC-Opu-083351	Oryza punctata	90.17	6.00e-130	455.00
IUUC-Oru-084306	Oryza rufipogon	89.20	4.00e-138	482.00
IUUC-Osa-085307	Oryza sativa	89.20	4.00e-138	482.00
IUUC-Olu-087646	Ostreococcus lucimarinus	42.86	3.00e-52	197.00
IUUC-Oar-090405	Ovis aries	43.67	7.00e-61	226.00
IUUC-Ptr-091595	Pan troglodytes	45.53	1.00e-61	229.00
IUUC-Psi-093110	Pelodiscus sinensis	43.10	2.00e-56	211.00
IUUC-Pma-094196	Petromyzon marinus	40.72	2.00e-44	172.00
IUUC-Pfo-097121	Poecilia formosa	44.72	1.00e-62	233.00
IUUC-Pab-098197	Pongo abelii	45.26	2.00e-57	214.00
IUUC-Pop-098821	Populus trichocarpa	78.26	2.00e-54	203.00
IUUC-Pca-100218	Procavia capensis	42.86	2.00e-60	224.00
IUUC-Ppe-102032	Prunus persica	75.10	2.00e-118	417.00
IUUC-Rno-105016	Rattus norvegicus	46.56	9.00e-64	236.00
IUUC-Sce-106358	Saccharomyces cerevisiae	25.38	1.00e-19	89.70
IUUC-Sha-106888	Sarcophilus harrisii	44.08	2.00e-61	228.00
IUUC-Spo-108207	Schizosaccharomyces pombe	34.69	2.00e-27	115.00
IUUC-Ssl-108410	Sclerotinia sclerotiorum	32.94	2.00e-33	135.00
IUUC-Sit-110613	Setaria italica	96.40	6.00e-147	512.00
IUUC-Sly-111489	Solanum lycopersicum	77.24	1.00e-117	414.00
IUUC-Stu-112517	Solanum tuberosum	62.00	1.00e-97	348.00
IUUC-Sar-113509	Sorex araneus	43.27	3.00e-41	160.00
IUUC-Sbi-114082	Sorghum bicolor	97.20	2.00e-147	513.00
IUUC-Tsy-119599	Tarsius syrichta	44.08	3.00e-61	227.00
IUUC-Tni-120542	Tetraodon nigroviridis	45.61	1.00e-60	225.00
IUUC-Tca-121033	Theobroma cacao	75.70	7.00e-120	422.00
IUUC-Tae-125740	Triticum aestivum	75.26	8.00e-129	452.00
IUUC-Tur-126375	Triticum urartu	68.12	6.00e-124	436.00
IUUC-Tme-126878	Tuber melanosporum	34.54	7.00e-38	150.00
IUUC-Tbe-127429	Tupaia belangeri	44.44	7.00e-48	183.00
IUUC-Ttr-129086	Tursiops truncatus	39.18	1.00e-51	196.00
IUUC-Vpa-130048	Vicugna pacos	38.78	7.00e-49	186.00
IUUC-Vvi-130834	Vitis vinifera	76.31	8.00e-119	419.00
IUUC-Xtr-131888	Xenopus tropicalis	44.08	6.00e-62	229.00
IUUC-Yli-134595	Yarrowia lipolytica	33.20	4.00e-37	147.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence