iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1010__AT3G09840.1	fgenesh2_kg.3__1010__AT3G09840.1	fgenesh2_kg.3__1010__AT3G09840.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Other/Other	68.37	0.00e+00	1093.00	IUUC-Sce-106244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSTPAESSDS KSKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPATM EKLQLFRGDT 60
ILIKGKKRKD TVCIALADES CEEPKIRMNK VVRSNLRVRL GDVISVHQCP DVKYGKRVHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGATATAA TTAGCGAACT CCTTCAGATC CCATTATCAC AAATCGATCT CTCTCTCAGA 60
AACCAAAAAG CTCTCAACTT TCTTCGATTT CTGAGGGAAC TCTTTCGTTA ATCTCAAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003593--AAA+_ATPase
IPR005938--AAA_ATPase_CDC48
IPR009010--Asp_de-COase-like_dom
IPR003959--ATPase_AAA_core
IPR003960--ATPase_AAA_CS
IPR004201--Cdc48_dom2
IPR029067--CDC48_domain_2-like
IPR003338--CDC4_N-term_subdom
IPR027417--P-loop_NTPase

PROSITE

Pfam

PF00004--AAA
PF02933--CDC48_2
PF02359--CDC48_N

SMART

SM00382--AAA
SM01072--CDC48_2
SM01073--CDC48_N

Gene Ontology

GO:0048046--C:apoplast
GO:0005618--C:cell wall
GO:0022626--C:cytosolic ribosome
GO:0005794--C:Golgi apparatus
GO:0005635--C:nuclear envelope
GO:0005730--C:nucleolus
GO:0009524--C:phragmoplast
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005819--C:spindle
GO:0005524--F:ATP binding
GO:0016787--F:hydrolase activity
GO:0051301--P:cell division
GO:0031348--P:negative regulation of defense response
GO:0009846--P:pollen germination
GO:0009860--P:pollen tube growth
GO:0031648--P:protein destabilization
GO:0046686--P:response to cadmium ion

KEGG

Orthology

Created Date

25-Jun-2017

Protein Fasta Sequence