iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112125

Ensembl Protein ID

PGSC0003DMT400044280

UniProt Accession

M1BFY0; M1BFY0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400017196	PGSC0003DMT400044280	PGSC0003DMT400044280

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.00e-17	62.2	2	68
E3 adaptor/Cullin RING/DCX/DWD	8.20e-27	93.4	262	292
UBD/Beta-Prp	9.20e-49	167.4	219	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e+++dPvv++ sG  ++++ Ie++++++gk cP+t++plt +d++P +t + +  + +++ s
   Q: 2    NCSISGEVPEDPVVSKkSGLLFEKRLIERHISDYGK-CPITGEPLTADDIIPVKTGKIVKPRPVQAAS 68
           7***********************************.*********************9998887765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  +  l+vsGs D+t++vW 
   Q: 262  GHSKRVTSVKFaAEgELVVSGSADKTVRVWQ 292
           8***********5559**************6 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsg 135
           + +++++ +++++  ++i++tg+ D ++ ++d  +g++++tl+gh+++v+s++f ++g+ +vsGs+d+t+rvw+ +++  +    +l+ 
   Q: 219  KTNKPGILSLDIHYAKDIIATGGVDSNAVIFDRPSGQIISTLSGHSKRVTSVKFAAEGELVVSGSADKTVRVWQSSENGNYDCrhVLKD 307
           578999******************************************************************9877654443234**** PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h++ v+ v+vh ++n++v++slD+t  ++dl++g +l +       +  +s +f+++g  l +g   + vk+wd++++  v ++ gh  
   Q: 308  HTAEVQAVTVHATNNYFVTASLDSTWCFYDLASGLCLAQVaDASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQANVAKFDGHVG 396
           ****************************************6333566677788************************************ PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
            v+ + fs+n+ +l+++++Dg +++Wdlr+ ++ +t+
   Q: 397  SVTAISFSENGYFLATAAHDG-VKLWDLRKLKNFRTF 432
           ********9999999988665.8******99988887 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNCSISGEVP EDPVVSKKSG LLFEKRLIER HISDYGKCPI TGEPLTADDI IPVKTGKIVK 60
PRPVQAASIP GMLGMFQIEW DGLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCATCTCC CTCGCTCTCA CTCTGCATCA GCTCCTTTTG TGCTACTTAA ACCCTAGCTC 60
TACCTCTTTG CCTTTCTCTC TCTTTCAACA ATGAACTGTT CAAGTAAGCT TCACTTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102600710

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	69.51	0.00e+00	752.00
IUUC-Aml-001230	Ailuropoda melanoleuca	45.21	6.00e-109	386.00
IUUC-Atr-002594	Amborella trichopoda	75.57	0.00e+00	814.00
IUUC-Apl-003686	Anas platyrhynchos	41.91	2.00e-82	298.00
IUUC-Aca-005272	Anolis carolinensis	44.77	2.00e-113	401.00
IUUC-Aly-005586	Arabidopsis lyrata	76.15	0.00e+00	837.00
IUUC-Ath-007693	Arabidopsis thaliana	74.86	0.00e+00	815.00
IUUC-Ago-007879	Ashbya gossypii	42.76	1.00e-24	107.00
IUUC-Acl-008335	Aspergillus clavatus	34.14	4.00e-60	224.00
IUUC-Afl-008527	Aspergillus flavus	34.24	2.00e-65	241.00
IUUC-Afu-008957	Aspergillus fumigatus	34.72	4.00e-68	251.00
IUUC-Ani-009280	Aspergillus nidulans	34.92	1.00e-64	239.00
IUUC-Ang-009746	Aspergillus niger	33.75	3.00e-65	241.00
IUUC-Aor-009905	Aspergillus oryzae	34.04	2.00e-67	248.00
IUUC-Ate-010412	Aspergillus terreus	36.33	3.00e-62	231.00
IUUC-Ame-011561	Astyanax mexicanus	42.49	7.00e-39	152.00
IUUC-Bgr-012283	Blumeria graminis	30.62	2.00e-49	188.00
IUUC-Bta-013242	Bos taurus	45.35	2.00e-113	401.00
IUUC-Bci-013901	Botrytis cinerea	32.75	1.00e-63	236.00
IUUC-Bdi-014277	Brachypodium distachyon	75.58	0.00e+00	833.00
IUUC-Bol-016207	Brassica oleracea	74.90	0.00e+00	824.00
IUUC-Bra-017650	Brassica rapa	75.48	0.00e+00	824.00
IUUC-Cel-018271	Caenorhabditis elegans	39.85	1.00e-101	362.00
IUUC-Cja-019879	Callithrix jacchus	45.07	2.00e-111	395.00
IUUC-Cfa-020175	Canis familiaris	45.54	6.00e-114	403.00
IUUC-Cpo-022379	Cavia porcellus	45.16	4.00e-113	400.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	47.68	2.00e-134	471.00
IUUC-Csa-023500	Chlorocebus sabaeus	45.16	7.00e-113	399.00
IUUC-Cho-025065	Choloepus hoffmanni	36.94	7.00e-40	156.00
IUUC-Cin-025699	Ciona intestinalis	46.22	1.00e-100	358.00
IUUC-Csv-026128	Ciona savignyi	44.19	2.00e-113	401.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	33.08	4.00e-64	237.00
IUUC-Cne-026860	Cryptococcus neoformans	38.51	8.00e-93	333.00
IUUC-Dre-028187	Danio rerio	44.59	3.00e-112	397.00
IUUC-Dno-029453	Dasypus novemcinctus	45.16	1.00e-112	399.00
IUUC-Dse-031220	Dothistroma septosporum	32.36	2.00e-59	222.00
IUUC-Dme-031906	Drosophila melanogaster	43.60	2.00e-107	381.00
IUUC-Ete-033035	Echinops telfairi	45.38	4.00e-56	211.00
IUUC-Eca-033478	Equus caballus	45.35	4.00e-113	400.00
IUUC-Eeu-034974	Erinaceus europaeus	45.78	2.00e-76	278.00
IUUC-Fca-036194	Felis catus	45.05	2.00e-112	397.00
IUUC-Fal-037417	Ficedula albicollis	44.77	2.00e-113	401.00
IUUC-Fox-037922	Fusarium oxysporum	32.21	2.00e-62	231.00
IUUC-Fso-038256	Fusarium solani	32.17	2.00e-65	241.00
IUUC-Gmo-038713	Gadus morhua	44.77	1.00e-113	402.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.38	7.00e-54	203.00
IUUC-Gga-041143	Gallus gallus	44.77	7.00e-114	402.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.19	9.00e-113	399.00
IUUC-Gma-043635	Glycine max	82.31	0.00e+00	896.00
IUUC-Ggo-045262	Gorilla gorilla	45.16	7.00e-113	399.00
IUUC-Hsa-046036	Homo sapiens	45.16	7.00e-113	399.00
IUUC-Hvu-047442	Hordeum vulgare	71.47	5.00e-136	475.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.57	1.00e-111	395.00
IUUC-Kpa-049195	Komagataella pastoris	45.67	3.00e-19	88.60
IUUC-Lch-050105	Latimeria chalumnae	43.82	3.00e-110	391.00
IUUC-Lpe-050976	Leersia perrieri	74.81	0.00e+00	822.00
IUUC-Loc-052042	Lepisosteus oculatus	39.71	7.00e-76	276.00
IUUC-Lma-053143	Leptosphaeria maculans	32.22	8.00e-62	231.00
IUUC-Laf-053451	Loxodonta africana	44.09	4.00e-110	390.00
IUUC-Mcc-055786	Macaca mulatta	45.16	7.00e-113	399.00
IUUC-Meu-056161	Macropus eugenii	41.38	5.00e-47	181.00
IUUC-Mor-057215	Magnaporthe oryzae	33.59	2.00e-58	218.00
IUUC-Mpo-057419	Magnaporthe poae	31.79	1.00e-49	189.00
IUUC-Mtr-057756	Medicago truncatula	76.55	0.00e+00	843.00
IUUC-Mla-059085	Melampsora laricipopulina	35.57	1.00e-78	286.00
IUUC-Mga-060158	Meleagris gallopavo	44.26	4.00e-100	357.00
IUUC-Mvi-060441	Microbotryum violaceum	34.91	3.00e-70	258.00
IUUC-Mmr-061085	Microcebus murinus	45.16	7.00e-113	399.00
IUUC-Mdo-061804	Monodelphis domestica	45.16	7.00e-113	399.00
IUUC-Mmu-063608	Mus musculus	43.55	2.00e-109	388.00
IUUC-Mac-064972	Musa acuminata	77.93	0.00e+00	841.00
IUUC-Mpu-065700	Mustela putorius furo	45.54	5.00e-114	403.00
IUUC-Mlu-068223	Myotis lucifugus	43.69	7.00e-110	389.00
IUUC-Nfi-068504	Neosartorya fischeri	36.04	8.00e-71	259.00
IUUC-Ncr-068729	Neurospora crassa	33.20	5.00e-58	217.00
IUUC-Nle-069754	Nomascus leucogenys	45.16	7.00e-113	399.00
IUUC-Opr-070621	Ochotona princeps	45.40	2.00e-105	374.00
IUUC-Ont-071377	Oreochromis niloticus	44.77	1.00e-112	399.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.13	8.00e-33	132.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.39	4.00e-109	387.00
IUUC-Oba-075509	Oryza barthii	75.43	0.00e+00	826.00
IUUC-Obr-076480	Oryza brachyantha	75.24	0.00e+00	830.00
IUUC-Ogl-077052	Oryza glaberrima	75.43	0.00e+00	825.00
IUUC-Ogu-078919	Oryza glumaepatula	75.43	0.00e+00	826.00
IUUC-Oin-079357	Oryza indica	71.79	0.00e+00	766.00
IUUC-Olo-080376	Oryza longistaminata	75.20	0.00e+00	771.00
IUUC-Ome-081973	Oryza meridionalis	75.41	0.00e+00	771.00
IUUC-Oni-082849	Oryza nivara	75.05	0.00e+00	822.00
IUUC-Opu-083243	Oryza punctata	75.82	0.00e+00	829.00
IUUC-Oru-084613	Oryza rufipogon	75.43	0.00e+00	825.00
IUUC-Osa-085407	Oryza sativa	75.24	0.00e+00	823.00
IUUC-Ola-086566	Oryzias latipes	43.74	9.00e-111	392.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.97	3.00e-112	397.00
IUUC-Oga-089010	Otolemur garnettii	43.81	1.00e-107	382.00
IUUC-Oar-089638	Ovis aries	45.35	2.00e-113	401.00
IUUC-Ptr-091141	Pan troglodytes	45.16	7.00e-113	399.00
IUUC-Pan-092662	Papio anubis	45.16	7.00e-113	399.00
IUUC-Psi-093777	Pelodiscus sinensis	44.83	4.00e-88	317.00
IUUC-Pno-095115	Phaeosphaeria nodorum	32.85	4.00e-61	227.00
IUUC-Ppa-095924	Physcomitrella patens	71.18	0.00e+00	762.00
IUUC-Pfo-096390	Poecilia formosa	44.57	4.00e-113	400.00
IUUC-Pab-098250	Pongo abelii	45.55	9.00e-109	385.00
IUUC-Pop-099854	Populus trichocarpa	83.24	0.00e+00	903.00
IUUC-Pca-100553	Procavia capensis	45.16	7.00e-111	392.00
IUUC-Ppe-101383	Prunus persica	79.58	0.00e+00	840.00
IUUC-Pva-102189	Pteropus vampyrus	45.35	2.00e-113	401.00
IUUC-Pgr-103304	Puccinia graminis	34.69	5.00e-76	277.00
IUUC-Ptt-103984	Puccinia triticina	33.89	9.00e-76	276.00
IUUC-Pte-104385	Pyrenophora teres	31.33	2.00e-61	228.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	31.54	5.00e-61	227.00
IUUC-Rno-105581	Rattus norvegicus	45.16	4.00e-113	400.00
IUUC-Sce-106147	Saccharomyces cerevisiae	37.58	1.00e-22	100.00
IUUC-Sha-107071	Sarcophilus harrisii	43.31	5.00e-109	387.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.10	2.00e-42	165.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.66	2.00e-40	159.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	32.12	9.00e-62	229.00
IUUC-Smo-109648	Selaginella moellendorffii	65.95	0.00e+00	723.00
IUUC-Sit-109873	Setaria italica	75.96	0.00e+00	839.00
IUUC-Sly-111673	Solanum lycopersicum	98.08	0.00e+00	1011.00
IUUC-Sbi-114696	Sorghum bicolor	70.38	0.00e+00	734.00
IUUC-Sre-115134	Sporisorium reilianum	33.69	9.00e-78	283.00
IUUC-Ssc-116260	Sus scrofa	45.35	2.00e-113	401.00
IUUC-Tgu-116533	Taeniopygia guttata	44.77	2.00e-113	401.00
IUUC-Tru-117800	Takifugu rubripes	44.23	2.00e-111	395.00
IUUC-Tsy-118980	Tarsius syrichta	43.28	3.00e-99	354.00
IUUC-Tni-120334	Tetraodon nigroviridis	45.48	1.00e-75	276.00
IUUC-Tca-121807	Theobroma cacao	79.92	0.00e+00	879.00
IUUC-Tre-121920	Trichoderma reesei	32.52	1.00e-59	222.00
IUUC-Tvi-122294	Trichoderma virens	32.78	1.00e-50	192.00
IUUC-Tae-125713	Triticum aestivum	74.04	0.00e+00	822.00
IUUC-Tur-126664	Triticum urartu	65.96	0.00e+00	772.00
IUUC-Tme-127026	Tuber melanosporum	36.09	3.00e-70	258.00
IUUC-Tbe-127582	Tupaia belangeri	45.48	3.00e-76	277.00
IUUC-Ttr-128313	Tursiops truncatus	45.35	7.00e-112	396.00
IUUC-Uma-129626	Ustilago maydis	35.30	4.00e-79	287.00
IUUC-Vda-129699	Verticillium dahliae	34.02	1.00e-59	222.00
IUUC-Vpa-130593	Vicugna pacos	46.44	6.00e-105	373.00
IUUC-Vvi-131668	Vitis vinifera	84.39	0.00e+00	930.00
IUUC-Xtr-132186	Xenopus tropicalis	45.54	6.00e-96	343.00
IUUC-Xma-133212	Xiphophorus maculatus	44.57	2.00e-112	397.00
IUUC-Yli-134607	Yarrowia lipolytica	52.67	4.00e-35	139.00
IUUC-Zma-135662	Zea mays	75.96	0.00e+00	841.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence