iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006484

Ensembl Protein ID

scaffold_402012.1

UniProt Accession

D7LGZ1; D7LGZ1_ARALL

Genbank Protein ID

EFH55749.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_902511

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_402012.1	scaffold_402012.1	scaffold_402012.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-16	58.6	93	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+d v+ l    ++t+++sG d g +kvWD+r+  + 
   Q: 93   HEDAVNTL-InvTETTIASGDDKGCVKVWDTRQRSCS 128
           99999998.664669***************9988776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEIDLGANAF GIDFHPSTNL IAAGLIDGHL HLYRYDSDSS LVRERKVRAH KESCRAVRFI 60
DDGQRIVTAS ADCSILATDV ETGAKVAHLE NAHEDAVNTL INVTETTIAS GDDKGCVKVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGATTTTC GCTGGTAGTG ATGGAGATCG ATTTGGGAGC GAACGCGTTC GGTATCGACT 60
TCCATCCATC GACGAATCTA ATAGCTGCTG GTCTCATCGA TGGCCACTTG CATCTGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_902511

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	46.71	5.00e-80	290.00
IUUC-Aml-001768	Ailuropoda melanoleuca	37.16	8.00e-50	191.00
IUUC-Atr-002764	Amborella trichopoda	56.44	4.00e-51	192.00
IUUC-Apl-003880	Anas platyrhynchos	36.08	2.00e-36	147.00
IUUC-Aca-005060	Anolis carolinensis	37.33	2.00e-47	183.00
IUUC-Ath-006652	Arabidopsis thaliana	89.68	6.00e-162	562.00
IUUC-Afl-008723	Aspergillus flavus	22.06	2.00e-11	62.80
IUUC-Bta-013497	Bos taurus	37.16	4.00e-50	191.00
IUUC-Bdi-014378	Brachypodium distachyon	52.33	1.00e-87	315.00
IUUC-Bol-016352	Brassica oleracea	77.40	2.00e-155	541.00
IUUC-Bra-017819	Brassica rapa	77.97	1.00e-155	541.00
IUUC-Cja-018792	Callithrix jacchus	36.15	5.00e-49	187.00
IUUC-Cfa-020739	Canis familiaris	37.16	8.00e-50	191.00
IUUC-Cpo-022331	Cavia porcellus	37.16	4.00e-50	191.00
IUUC-Csa-023414	Chlorocebus sabaeus	36.49	1.00e-49	189.00
IUUC-Cho-024600	Choloepus hoffmanni	34.80	6.00e-46	177.00
IUUC-Cin-025565	Ciona intestinalis	31.88	1.00e-35	143.00
IUUC-Csv-026294	Ciona savignyi	30.42	3.00e-33	135.00
IUUC-Cne-026979	Cryptococcus neoformans	27.36	2.00e-28	119.00
IUUC-Dre-028492	Danio rerio	32.67	7.00e-39	153.00
IUUC-Dno-030050	Dasypus novemcinctus	34.67	3.00e-46	179.00
IUUC-Dor-030386	Dipodomys ordii	30.74	2.00e-35	142.00
IUUC-Dme-032012	Drosophila melanogaster	30.58	5.00e-35	141.00
IUUC-Ete-032491	Echinops telfairi	37.50	2.00e-50	192.00
IUUC-Eca-033583	Equus caballus	36.49	1.00e-50	194.00
IUUC-Eeu-034976	Erinaceus europaeus	38.06	2.00e-42	165.00
IUUC-Fca-036417	Felis catus	37.63	2.00e-51	196.00
IUUC-Gmo-039505	Gadus morhua	33.33	4.00e-43	167.00
IUUC-Ggr-039978	Gaeumannomyces graminis	27.92	7.00e-13	67.80
IUUC-Gga-040732	Gallus gallus	33.70	2.00e-43	168.00
IUUC-Gac-041313	Gasterosteus aculeatus	32.99	3.00e-42	164.00
IUUC-Gma-044122	Glycine max	64.31	2.00e-115	407.00
IUUC-Ggo-044748	Gorilla gorilla	36.15	8.00e-50	190.00
IUUC-Hsa-046943	Homo sapiens	36.15	2.00e-49	188.00
IUUC-Hvu-047659	Hordeum vulgare	52.41	4.00e-89	320.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	37.16	8.00e-51	193.00
IUUC-Lch-050331	Latimeria chalumnae	31.89	4.00e-41	161.00
IUUC-Lpe-051193	Leersia perrieri	56.75	4.00e-94	337.00
IUUC-Loc-051946	Lepisosteus oculatus	33.45	4.00e-43	169.00
IUUC-Lma-052960	Leptosphaeria maculans	24.01	3.00e-12	65.90
IUUC-Laf-054035	Loxodonta africana	37.50	2.00e-51	195.00
IUUC-Meu-056596	Macropus eugenii	36.15	1.00e-47	183.00
IUUC-Mpo-057482	Magnaporthe poae	28.57	8.00e-13	67.40
IUUC-Mtr-058587	Medicago truncatula	61.11	1.00e-117	415.00
IUUC-Mga-059839	Meleagris gallopavo	36.92	5.00e-27	115.00
IUUC-Mdo-062868	Monodelphis domestica	35.47	2.00e-46	180.00
IUUC-Mmu-064305	Mus musculus	36.49	7.00e-49	187.00
IUUC-Mac-065041	Musa acuminata	58.71	5.00e-114	403.00
IUUC-Mpu-066779	Mustela putorius furo	36.27	6.00e-50	190.00
IUUC-Mlu-067223	Myotis lucifugus	36.49	1.00e-47	184.00
IUUC-Nle-069852	Nomascus leucogenys	36.15	5.00e-49	187.00
IUUC-Ont-072452	Oreochromis niloticus	33.56	2.00e-45	175.00
IUUC-Ocu-074628	Oryctolagus cuniculus	36.82	2.00e-49	189.00
IUUC-Oba-075868	Oryza barthii	56.45	7.00e-92	329.00
IUUC-Obr-076768	Oryza brachyantha	53.91	1.00e-95	342.00
IUUC-Ogl-077424	Oryza glaberrima	56.79	6.00e-94	336.00
IUUC-Ogu-078847	Oryza glumaepatula	56.10	2.00e-91	328.00
IUUC-Oin-079495	Oryza indica	56.79	6.00e-94	336.00
IUUC-Olo-080268	Oryza longistaminata	56.45	1.00e-91	329.00
IUUC-Ome-081709	Oryza meridionalis	56.49	6.00e-82	296.00
IUUC-Oni-082749	Oryza nivara	56.79	6.00e-94	336.00
IUUC-Opu-084023	Oryza punctata	46.13	6.00e-68	249.00
IUUC-Oru-084764	Oryza rufipogon	56.10	2.00e-91	328.00
IUUC-Osa-086009	Oryza sativa	56.79	3.00e-94	337.00
IUUC-Ola-086463	Oryzias latipes	33.66	4.00e-38	151.00
IUUC-Olu-087897	Ostreococcus lucimarinus	36.95	8.00e-45	173.00
IUUC-Oga-089114	Otolemur garnettii	37.50	1.00e-51	196.00
IUUC-Ptr-090556	Pan troglodytes	35.81	2.00e-49	188.00
IUUC-Pan-092828	Papio anubis	36.49	5.00e-50	191.00
IUUC-Psi-093609	Pelodiscus sinensis	32.49	1.00e-34	140.00
IUUC-Pma-094413	Petromyzon marinus	34.92	4.00e-39	154.00
IUUC-Pno-094833	Phaeosphaeria nodorum	27.81	8.00e-12	64.30
IUUC-Ppa-095422	Physcomitrella patens	51.53	1.00e-81	296.00
IUUC-Pfo-096389	Poecilia formosa	32.88	1.00e-42	166.00
IUUC-Pab-098095	Pongo abelii	36.49	4.00e-50	191.00
IUUC-Pop-099612	Populus trichocarpa	60.28	4.00e-116	410.00
IUUC-Pca-100408	Procavia capensis	36.49	3.00e-48	184.00
IUUC-Ppe-101931	Prunus persica	61.41	3.00e-115	407.00
IUUC-Pva-102549	Pteropus vampyrus	36.15	3.00e-50	191.00
IUUC-Rno-105079	Rattus norvegicus	36.82	1.00e-49	190.00
IUUC-Sha-107299	Sarcophilus harrisii	37.50	1.00e-43	171.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	28.38	5.00e-13	68.20
IUUC-Spo-108122	Schizosaccharomyces pombe	25.86	6.00e-19	87.40
IUUC-Smo-109613	Selaginella moellendorffii	46.80	3.00e-64	238.00
IUUC-Sit-110621	Setaria italica	50.14	8.00e-97	346.00
IUUC-Sly-110988	Solanum lycopersicum	62.90	4.00e-113	400.00
IUUC-Stu-112713	Solanum tuberosum	58.87	2.00e-114	404.00
IUUC-Sbi-114617	Sorghum bicolor	53.64	6.00e-93	333.00
IUUC-Sre-115136	Sporisorium reilianum	31.49	2.00e-16	80.10
IUUC-Ssc-116268	Sus scrofa	37.16	1.00e-49	191.00
IUUC-Tgu-116720	Taeniopygia guttata	31.08	9.00e-23	101.00
IUUC-Tru-117977	Takifugu rubripes	36.18	3.00e-41	162.00
IUUC-Tni-119904	Tetraodon nigroviridis	34.46	2.00e-45	176.00
IUUC-Tca-121718	Theobroma cacao	63.76	2.00e-120	424.00
IUUC-Tae-124364	Triticum aestivum	54.39	2.00e-89	321.00
IUUC-Tme-126922	Tuber melanosporum	23.42	5.00e-14	72.00
IUUC-Tbe-127276	Tupaia belangeri	36.59	2.00e-42	164.00
IUUC-Vpa-130276	Vicugna pacos	35.78	4.00e-32	130.00
IUUC-Vvi-131377	Vitis vinifera	61.43	5.00e-115	408.00
IUUC-Xtr-132529	Xenopus tropicalis	34.04	1.00e-44	174.00
IUUC-Xma-134177	Xiphophorus maculatus	32.88	9.00e-39	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence