iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114594

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G061900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g005270	Sb03g005270.1	Sb03g005270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.30e-09	37.0	470	511

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle +kd   + +l C H fhadC++kw       +++ +CP+C+
   Q: 470  CIICLEGYKDKdmLGILKCRHDFHADCIKKW------LQTKNSCPVCK 511
           ********7763355799*************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARNNQGHLQ LPEMDHIQPK NIPHNESLPL GQKLLLHHGS DAPLRIGHST HGNMGHRIND 60
LPSSSRTVQT LGYRVGNPGT SHAPFVHYHA GSSSSHLPAE PAVDYLHRSE EGFAPVGSHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCCCCTCC CGGCCTCCTC TCTCTCTGCT CTCTCTCTCT CATACGGACA AATTCGGCTC 60
GCCGCTTTGT TTACAGCGGC GACGCAAGCC ACGCAGCGAG CCGCGGTTGG GTTGGCGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_03g005270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001109	Aegilops tauschii	53.85	2.00e-140	491.00
IUUC-Ame-011569	Astyanax mexicanus	30.17	9.00e-16	77.00
IUUC-Cpo-022130	Cavia porcellus	27.70	2.00e-16	79.70
IUUC-Cne-026985	Cryptococcus neoformans	33.66	9.00e-13	68.60
IUUC-Dre-028483	Danio rerio	30.17	2.00e-16	79.30
IUUC-Lch-050227	Latimeria chalumnae	31.25	5.00e-16	78.20
IUUC-Lpe-051522	Leersia perrieri	51.09	2.00e-115	408.00
IUUC-Loc-052302	Lepisosteus oculatus	30.17	1.00e-15	77.00
IUUC-Mac-065588	Musa acuminata	29.43	5.00e-41	161.00
IUUC-Oba-075724	Oryza barthii	54.55	2.00e-132	464.00
IUUC-Obr-076624	Oryza brachyantha	53.60	6.00e-116	410.00
IUUC-Ogl-077689	Oryza glaberrima	54.55	1.00e-132	465.00
IUUC-Ogu-078097	Oryza glumaepatula	53.83	4.00e-96	343.00
IUUC-Oin-079530	Oryza indica	54.69	4.00e-130	457.00
IUUC-Olo-080582	Oryza longistaminata	50.58	3.00e-113	400.00
IUUC-Ome-081859	Oryza meridionalis	53.71	2.00e-124	437.00
IUUC-Oni-082354	Oryza nivara	54.73	4.00e-125	441.00
IUUC-Opu-083421	Oryza punctata	53.46	3.00e-124	437.00
IUUC-Oru-085113	Oryza rufipogon	54.55	2.00e-132	464.00
IUUC-Osa-085539	Oryza sativa	54.55	1.00e-132	465.00
IUUC-Sit-109900	Setaria italica	77.39	0.00e+00	702.00
IUUC-Sre-114942	Sporisorium reilianum	57.14	4.00e-12	66.20
IUUC-Tru-117715	Takifugu rubripes	29.46	5.00e-16	78.20
IUUC-Tni-119691	Tetraodon nigroviridis	29.46	3.00e-16	78.60
IUUC-Tca-121354	Theobroma cacao	51.16	2.00e-42	166.00
IUUC-Tae-124415	Triticum aestivum	54.40	3.00e-137	480.00
IUUC-Tur-126872	Triticum urartu	51.12	4.00e-132	464.00
IUUC-Uma-129479	Ustilago maydis	55.10	4.00e-12	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence