iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051564

Ensembl Protein ID

LPERR01G04700.1

UniProt Accession

A0A0D9UXG1; A0A0D9UXG1_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G04700	LPERR01G04700.1	LPERR01G04700.1
LPERR01G04700	LPERR01G04700.2	LPERR01G04700.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-23	80.7	576	613
UBD/Beta-Prp	1.70e-43	149.8	487	729

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++sv +l+f  +  +l++s+ +D+ i+ W++  g+ 
   Q: 576  GHSASVMSLDFhpNKdDLICSCDGDNEIRFWSINNGNI 613
           8***********6226***************9877765 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghed 95
            ++++++ +v++  +fs d++llatg+ d+++ +w ++t k  + l++h+  +t+v+fsp+   l+t+s D+t++vwd + +g  ++t++gh++
   Q: 487  SSVQASMNKVVC-CHFSSDGKLLATGGHDKKVVLWHAETLKQKSILEEHSLLITDVRFSPSIARLATSSFDKTVRVWDADnQGYSFRTFTGHSA 579
           567888999998.7899*************************************************************9967899********* PP
   S: 96   svlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           sv+sl+f+p++ d + s + d+ ir w +++g  ++ +++g +   + ++++p    +l+++s  ++v + d++t+ ++r+++g ht+ v s+ 
   Q: 580  SVMSLDFHPNKdDLICSCDGDNEIRFWSINNGNIVR-IFKGGS---SQLRFQPRLgGYLAAAS-ENAVSILDVETQACIRRFEG-HTKHVDSMC 667
           *********877999********************9.888888...78999999856666555.689****************9.********* PP
   S: 188  fdsngkelvsgsldg..tvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +d++g+++vs+s+d+  +++lwd+++++  +tl +h++ ++ ++ s  + +++s+s+D+ +++W
   Q: 668  WDPTGEYVVSVSEDTvkSLELWDMSENR-TMTLAAHDSLITALASS-SSGLVASTSHDKFVKLW 729
           **************6447******8775.99**********99999.999************** PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAQGAWEAEK MLDVYIHDYL LKRNLHSTAK AFQAEGNVSS DPVAIDAPGG FLLEWWSVFW 60
DIFIARTNEK HSEVAASYIE MYEERVKNSV QRNTLDEAPA KQQRFTENIG QLLESNSSSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCATTAGA ACAGTTACGA AGGTCGAAAG TGTAAAATGT GCAGTGATTT GGCATTTTCA 60
GGATTAAAAT TTTCTGGTTG AACTGAAGTT AAAACCACCC ATTACAAAGC CCTTCCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000255	Aegilops tauschii	61.22	1.00e-178	619.00
IUUC-Bdi-014657	Brachypodium distachyon	65.05	0.00e+00	815.00
IUUC-Hvu-047499	Hordeum vulgare	67.39	4.00e-147	513.00
IUUC-Oba-075419	Oryza barthii	82.14	0.00e+00	937.00
IUUC-Obr-076118	Oryza brachyantha	78.97	0.00e+00	932.00
IUUC-Ogl-077064	Oryza glaberrima	78.68	0.00e+00	924.00
IUUC-Ogu-078816	Oryza glumaepatula	83.76	0.00e+00	946.00
IUUC-Oin-079222	Oryza indica	83.76	0.00e+00	947.00
IUUC-Ome-081375	Oryza meridionalis	83.76	0.00e+00	942.00
IUUC-Oni-082753	Oryza nivara	80.82	0.00e+00	935.00
IUUC-Opu-083283	Oryza punctata	83.76	0.00e+00	942.00
IUUC-Oru-084538	Oryza rufipogon	82.28	0.00e+00	937.00
IUUC-Osa-086142	Oryza sativa	78.96	0.00e+00	928.00
IUUC-Sit-110603	Setaria italica	62.03	0.00e+00	761.00
IUUC-Tae-125545	Triticum aestivum	64.58	0.00e+00	717.00
IUUC-Tur-126626	Triticum urartu	62.27	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence