iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114302

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G036800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g003290	Sb03g003290.1	Sb03g003290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	92.0	130	167

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ ++++++   s + l sG+ Dg++++WD  +g+++
   Q: 130  GHTEAISGISLplgS-DKLYSGGADGSVRIWDCNSGKCV 167
           8**********9744.899*****************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPISSSLAAR LRTGHSPAPA PGRARWSPYA RPSVPEPCGG GKASRPTLRL DPVTTRLLGP 60
VQKAVLSGSS RRAEPDAPEA SARRRRGNDM TSPKPEPKPK PANGDDRTPV EEKRRSSGEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATCT CCTCCTCCCT CGCCGCGCGC CTCCGCACCG GCCACTCCCC GGCGCCCGCG 60
CCCGGGCGCG CGCGGTGGAG CCCCTACGCC AGACCCTCTG TGCCTGAGCC CTGCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_03g003290

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	59.88	5.00e-106	376.00
IUUC-Bdi-014959	Brachypodium distachyon	70.08	9.00e-142	495.00
IUUC-Lpe-051507	Leersia perrieri	66.44	6.00e-146	509.00
IUUC-Oba-075357	Oryza barthii	75.55	6.00e-122	429.00
IUUC-Obr-076846	Oryza brachyantha	67.29	5.00e-154	536.00
IUUC-Ogl-077192	Oryza glaberrima	80.08	2.00e-118	417.00
IUUC-Ogu-077987	Oryza glumaepatula	61.92	8.00e-145	506.00
IUUC-Oin-079320	Oryza indica	66.67	1.00e-157	548.00
IUUC-Olo-080642	Oryza longistaminata	81.40	4.00e-140	492.00
IUUC-Ome-081921	Oryza meridionalis	61.12	6.00e-138	483.00
IUUC-Oni-082030	Oryza nivara	63.11	2.00e-153	534.00
IUUC-Opu-083302	Oryza punctata	64.13	5.00e-150	523.00
IUUC-Oru-085210	Oryza rufipogon	62.24	3.00e-152	530.00
IUUC-Sit-110042	Setaria italica	76.08	9.00e-173	598.00
IUUC-Tae-123685	Triticum aestivum	69.71	3.00e-142	497.00
IUUC-Tur-126339	Triticum urartu	75.53	3.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence