iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051634

Ensembl Protein ID

LPERR01G08030.1

UniProt Accession

A0A0D9UYQ7; A0A0D9UYQ7_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G08030	LPERR01G08030.1	LPERR01G08030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-21	75.9	210	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           H d v+cl +     +ll ++s+D+t+k W l++g + 
   Q: 210  HRDTVSCLVLhaaA-GLLYTASHDHTVKAWKLSDGSCA 246
           99*****9888542.8*******************996 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MDFGRRKSFS FFEEDWKSRP TSAGAARTPV HHHYAAAAAG GARSPARDPP RLSLSSVHGV 60
DLPTIGGAGG MCSPWIQSPR HGRVPFPSSP AAAIYHCLSA LHRLDGDVHA LAVSRGVLFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTTG GGAGGAGGAA GAGCTTCAGC TTCTTCGAGG AGGACTGGAA GTCACGGCCG 60
ACGTCAGCAG GTGCGGCACG AACGCCGGTG CACCACCACT ACGCCGCCGC CGCCGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	74.45	9.00e-141	492.00
IUUC-Atr-002893	Amborella trichopoda	46.86	2.00e-64	238.00
IUUC-Bdi-014017	Brachypodium distachyon	78.91	2.00e-165	574.00
IUUC-Gma-044257	Glycine max	49.86	3.00e-92	331.00
IUUC-Hvu-047512	Hordeum vulgare	73.51	4.00e-74	270.00
IUUC-Mtr-058235	Medicago truncatula	41.19	1.00e-88	320.00
IUUC-Mac-064451	Musa acuminata	52.92	1.00e-96	346.00
IUUC-Ogl-077347	Oryza glaberrima	82.32	0.00e+00	692.00
IUUC-Ogu-079043	Oryza glumaepatula	82.14	0.00e+00	692.00
IUUC-Oin-079372	Oryza indica	82.41	0.00e+00	684.00
IUUC-Ome-081348	Oryza meridionalis	80.73	0.00e+00	668.00
IUUC-Oni-082993	Oryza nivara	82.32	0.00e+00	692.00
IUUC-Opu-083517	Oryza punctata	71.02	3.00e-149	521.00
IUUC-Oru-085049	Oryza rufipogon	82.14	0.00e+00	692.00
IUUC-Osa-085538	Oryza sativa	82.32	0.00e+00	689.00
IUUC-Pop-100024	Populus trichocarpa	48.72	3.00e-94	338.00
IUUC-Ppe-101634	Prunus persica	45.68	2.00e-86	311.00
IUUC-Sit-110460	Setaria italica	74.58	0.00e+00	627.00
IUUC-Stu-112837	Solanum tuberosum	41.40	6.00e-92	330.00
IUUC-Sbi-113780	Sorghum bicolor	74.35	4.00e-164	570.00
IUUC-Tca-121243	Theobroma cacao	42.53	2.00e-95	342.00
IUUC-Tae-123954	Triticum aestivum	75.14	9.00e-178	615.00
IUUC-Vvi-131707	Vitis vinifera	50.57	3.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence